Sequence Similarity Clusters for the Entities in PDB 4RKM

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
MccA protein, length: 732 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 3239
95 % 2 2 4000 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 2 4045
70 % 2 2 3997
50 % 2 2 3881
40 % 2 2 3727
30 % 2 2 3489

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures