Sequence Similarity Clusters for the Entities in PDB 4RHV

Entity #1 | Chains: 1
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP1) protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 26 1709
95 % 2 36 1503
90 % 2 36 1533
70 % 2 37 1473
50 % 2 37 1535
40 % 19 159 275
30 % 19 159 284
Entity #2 | Chains: 2
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 28 1562
95 % 2 35 1571 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.0
PDBFlex
90 % 2 36 1539
70 % 2 37 1475
50 % 18 159 307
40 % 18 159 319
30 % 27 194 165
Entity #3 | Chains: 3
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 36 1126
95 % 2 36 1516 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.2
PDBFlex
90 % 2 36 1546
70 % 2 37 1477
50 % 19 168 242
40 % 19 170 260
30 % 28 209 147
Entity #4 | Chains: 4
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 35 1183
95 % 2 36 1545 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.1
PDBFlex
90 % 2 36 1576
70 % 8 87 567
50 % 17 122 435
40 % 17 123 462
30 % 17 123 459

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.