Sequence Similarity Clusters for the Entities in PDB 4RHV

Entity #1 | Chains: 1
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP1) protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 26 1659
95 % 2 36 1465 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 2 36 1494
70 % 2 37 1437
50 % 2 37 1494
40 % 18 155 276
30 % 18 155 284
Entity #2 | Chains: 2
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 28 1516
95 % 2 35 1525 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.1
PDBFlex
90 % 2 36 1499
70 % 2 37 1438
50 % 17 157 295
40 % 17 157 309
30 % 26 192 164
Entity #3 | Chains: 3
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 36 1087
95 % 2 36 1474 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.2
PDBFlex
90 % 2 36 1503
70 % 2 37 1440
50 % 18 164 241
40 % 18 166 257
30 % 27 203 149
Entity #4 | Chains: 4
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 35 1135
95 % 2 36 1499 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.2
PDBFlex
90 % 2 36 1530
70 % 8 87 551
50 % 16 122 423
40 % 16 123 447
30 % 16 123 446

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.