Sequence Similarity Clusters for the Entities in PDB 4RHV

Entity #1 | Chains: 1
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP1) protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 26 1680
95 % 2 36 1486 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.5
PDBFlex
90 % 2 36 1516
70 % 2 37 1455
50 % 2 37 1513
40 % 18 158 274
30 % 18 158 282
Entity #2 | Chains: 2
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 28 1533
95 % 2 35 1552 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 2 36 1522
70 % 2 37 1456
50 % 17 159 294
40 % 17 159 310
30 % 26 194 165
Entity #3 | Chains: 3
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 36 1102
95 % 2 36 1499 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.1
PDBFlex
90 % 2 36 1529
70 % 2 37 1458
50 % 18 167 239
40 % 18 169 255
30 % 27 208 146
Entity #4 | Chains: 4
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 35 1154
95 % 2 36 1527
90 % 2 36 1557
70 % 8 87 558
50 % 16 122 428
40 % 16 123 455
30 % 16 123 454

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.