Sequence Similarity Clusters for the Entities in PDB 4RHV

Entity #1 | Chains: 1
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP1) protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 22 2054
95 % 2 32 1632 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 2 32 1668
70 % 2 33 1634
50 % 2 33 1688
40 % 18 149 283
30 % 18 149 289
Entity #2 | Chains: 2
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 28 1474
95 % 2 31 1708 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.1
PDBFlex
90 % 2 32 1672
70 % 2 33 1635
50 % 17 151 305
40 % 17 151 317
30 % 26 186 166
Entity #3 | Chains: 3
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3) protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 32 1212
95 % 2 32 1650 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.2
PDBFlex
90 % 2 32 1683
70 % 2 33 1642
50 % 18 158 249
40 % 18 160 264
30 % 27 197 151
Entity #4 | Chains: 4
HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP4) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 32 1250
95 % 2 33 1589 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.2
PDBFlex
90 % 2 33 1625
70 % 8 82 588
50 % 16 117 432
40 % 16 118 460
30 % 16 118 457

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.