Sequence Similarity Clusters for the Entities in PDB 4QTR

Entity #1 | Chains: A,B,C,D
dualENH protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21689
95 % 1 1 20574 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 1 19976
70 % 1 1 18333
50 % 1 1 15897
40 % 1 1 13516
30 % 1 1 11362
Entity #2 | Chains: E,G
DNA (5'-D(P*GP*TP*GP*TP*AP*AP*TP*TP*TP*AP*AP*TP*TP*TP*CP*C)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F,H
DNA (5'-D(P*CP*GP*GP*AP*AP*AP*TP*TP*AP*AP*AP*TP*TP*AP*CP*A)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures