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Crystal structure of the ROQ domain of human Roquin in complex with the Hmg19 stem-loop RNA
Sequence Clustering and Redundancy Reduction Results
4QIL
Sequence Clusters for the Sequence Entities in PDB 4QIL
Entity #1: Chains: A,B - Roquin-1 protein, length: 330 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 13807
95% 2 2 12585
90% 2 2 12373
70% 2 2 11616
50% 2 2 10300
40% 2 2 9318
30% 2 2 8126
Entity #2: Chains: C,D - 5'-R(*CP*UP*CP*CP*CP*UP*UP*CP*UP*GP*UP*GP*AP*AP*GP*GP*GP*GP*A)-3' rna, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.