Sequence Similarity Clusters for the Entities in PDB 4QIK

Entity #1 | Chains: A,B
Roquin-1 protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 18800
95 % 1 2 16781 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 2.1
PDBFlex
90 % 1 2 16444
70 % 1 4 9584
50 % 1 4 8682
40 % 1 4 7952
30 % 1 4 7021
Entity #2 | Chains: C,D
5'-R(*AP*C*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3' rna, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4QIK 1 A, B Roquin-1 ROQ domain (UNP residues 88-407) 9606
2 4QIL 1 A, B Roquin-1 ROQ domain (UNP residues 88-407) 9606