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An Information Portal to 105906 Biological Macromolecular Structures

Crystal structure of the ROQ domain of human Roquin in complex with the TNF23 RNA duplex
Sequence Clustering and Redundancy Reduction Results
4QIK
Sequence Clusters for the Sequence Entities in PDB 4QIK
Entity #1: Chains: A,B - Roquin-1 protein, length: 330 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 14254
95% 1 2 12960
90% 1 2 12738
70% 1 2 11946
50% 1 2 10594
40% 1 2 9582
30% 1 2 8338
Entity #2: Chains: C,D - 5'-R(*AP*C*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3' rna, length: 23 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.