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Crystal structure of the ROQ domain of human Roquin in complex with the TNF23 RNA duplex
Sequence Clustering and Redundancy Reduction Results
4QIK
Sequence Clusters for the Sequence Entities in PDB 4QIK
Entity #1: Chains: A,B - Roquin-1 protein, length: 330 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 13911
95% 1 2 12684
90% 1 2 12467
70% 1 2 11701
50% 1 2 10371
40% 1 2 9381
30% 1 2 8175
Entity #2: Chains: C,D - 5'-R(*AP*C*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3' rna, length: 23 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.