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Crystal structure of the ROQ domain of human Roquin in complex with the TNF23 RNA duplex
Sequence Clustering and Redundancy Reduction Results
4QIK
Sequence Clusters for the Sequence Entities in PDB 4QIK
Entity #1: Chains: A,B - Roquin-1 protein, length: 330 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 14435
95% 1 2 13085
90% 1 2 12854
70% 1 2 12054
50% 1 2 10680
40% 1 2 9663
30% 1 2 8400
Entity #2: Chains: C,D - 5'-R(*AP*C*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3' rna, length: 23 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.