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An Information Portal to 107620 Biological Macromolecular Structures

Crystal structure of the ROQ domain of human Roquin in complex with the TNF23 RNA duplex
Sequence Clustering and Redundancy Reduction Results
4QIK
Sequence Clusters for the Sequence Entities in PDB 4QIK
Entity #1: Chains: A,B - Roquin-1 protein, length: 330 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 14546
95% 1 2 13158
90% 1 2 12926
70% 1 2 12118
50% 1 2 10738
40% 1 2 9711
30% 1 2 8442
Entity #2: Chains: C,D - 5'-R(*AP*C*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3' rna, length: 23 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.