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An Information Portal to 105339 Biological Macromolecular Structures

Crystal structure of the ROQ domain of human Roquin in complex with the TNF23 RNA duplex
Sequence Clustering and Redundancy Reduction Results
4QIK
Sequence Clusters for the Sequence Entities in PDB 4QIK
Entity #1: Chains: A,B - Roquin-1 protein, length: 330 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 14169
95% 1 2 12892
90% 1 2 12670
70% 1 2 11884
50% 1 2 10547
40% 1 2 9535
30% 1 2 8304
Entity #2: Chains: C,D - 5'-R(*AP*C*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3' rna, length: 23 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.