Sequence Similarity Clusters for the Entities in PDB 4PRG

Entity #1 | Chains: A,B,C,D
PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA) protein, length: 270 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 159 161 91
95 % 167 169 117 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.7
PDBFlex
90 % 167 169 121
70 % 167 169 136
50 % 221 226 104
40 % 221 226 128
30 % 967 1020 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures