Sequence Similarity Clusters for the Entities in PDB 4PRG

Entity #1 | Chains: A,B,C,D
PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA) protein, length: 270 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 149 150 88
95 % 157 158 113 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.7
PDBFlex
90 % 157 158 117
70 % 157 158 133
50 % 211 215 103
40 % 211 215 129
30 % 930 977 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.