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Crystal structure of Streptococcus pyogenes Cas9 in complex with guide RNA and target DNA
Sequence Clustering and Redundancy Reduction Results
4OO8
Sequence Clusters for the Sequence Entities in PDB 4OO8
Entity #1: Chains: A,D - CRISPR-associated endonuclease Cas9/Csn1 protein, length: 1372 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 23820
95% 3 6 5823
90% 3 6 5813
70% 3 6 5684
50% 3 6 5299
40% 3 6 4965
30% 3 6 4475
Entity #2: Chains: B,E - RNA (97-MER) rna, length: 98 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C,F - DNA (5'-D(*CP*CP*AP*GP*CP*CP*AP*AP*GP*CP*GP*CP*AP*CP*CP*TP*AP*AP*TP*TP*TP*CP*C)-3') dna, length: 23 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.