POP-OUT | CLOSE

An Information Portal to 111749 Biological Macromolecular Structures

Crystal structure of Streptococcus pyogenes Cas9 in complex with guide RNA and target DNA
Sequence Clustering and Redundancy Reduction Results
4OO8
Sequence Clusters for the Sequence Entities in PDB 4OO8
Entity #1: Chains: A,D - CRISPR-associated endonuclease Cas9/Csn1 protein, length: 1372 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 24578
95% 3 8 3976
90% 3 8 4001
70% 3 8 3950
50% 3 8 3804
40% 3 8 3631
30% 3 8 3362
Entity #2: Chains: B,E - RNA (97-MER) rna, length: 98 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C,F - DNA (5'-D(*CP*CP*AP*GP*CP*CP*AP*AP*GP*CP*GP*CP*AP*CP*CP*TP*AP*AP*TP*TP*TP*CP*C)-3') dna, length: 23 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.