POP-OUT | CLOSE

An Information Portal to 108607 Biological Macromolecular Structures

Crystal structure of Streptococcus pyogenes Cas9 in complex with guide RNA and target DNA
Sequence Clustering and Redundancy Reduction Results
4OO8
Sequence Clusters for the Sequence Entities in PDB 4OO8
Entity #1: Chains: A,D - CRISPR-associated endonuclease Cas9/Csn1 protein, length: 1372 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 23753
95% 3 6 5805
90% 3 6 5795
70% 3 6 5665
50% 3 6 5285
40% 3 6 4951
30% 3 6 4461
Entity #2: Chains: B,E - RNA (97-MER) rna, length: 98 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C,F - DNA (5'-D(*CP*CP*AP*GP*CP*CP*AP*AP*GP*CP*GP*CP*AP*CP*CP*TP*AP*AP*TP*TP*TP*CP*C)-3') dna, length: 23 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.