Sequence Similarity Clusters for the Entities in PDB 4OO8

Entity #1 | Chains: A,D
CRISPR-associated endonuclease Cas9/Csn1 protein, length: 1372 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 26736
95 % 8 16 2480
90 % 8 16 2520
70 % 8 16 2513
50 % 8 16 2501
40 % 8 16 2478
30 % 8 16 2309
Entity #2 | Chains: B,E
RNA (97-MER) rna, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C,F
DNA (5'-D(*CP*CP*AP*GP*CP*CP*AP*AP*GP*CP*GP*CP*AP*CP*CP*TP*AP*AP*TP*TP*TP*CP*C)-3') dna, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.