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Crystal structure of Streptococcus pyogenes Cas9 in complex with guide RNA and target DNA
Sequence Clustering and Redundancy Reduction Results
4OO8
Sequence Clusters for the Sequence Entities in PDB 4OO8
Entity #1: Chains: A,D - CRISPR-associated endonuclease Cas9/Csn1 protein, length: 1372 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 22328
95% 3 6 5401
90% 3 6 5406
70% 3 6 5316
50% 3 6 4996
40% 3 6 4683
30% 3 6 4240
Entity #2: Chains: B,E - RNA (97-MER) rna, length: 98 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C,F - DNA (5'-D(*CP*CP*AP*GP*CP*CP*AP*AP*GP*CP*GP*CP*AP*CP*CP*TP*AP*AP*TP*TP*TP*CP*C)-3') dna, length: 23 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.