Sequence Similarity Clusters for the Entities in PDB 4OLA

Entity #1 | Chains: A
Protein argonaute-2 protein, length: 859 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 15 3565
95 % 9 20 3050 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.7
PDBFlex
90 % 9 20 3093
70 % 12 25 2307
50 % 12 25 2287
40 % 12 25 2275
30 % 12 25 2164
Entity #2 | Chains: B
5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*U)-3' rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures