Sequence Similarity Clusters for the Entities in PDB 4OLA

Entity #1 | Chains: A
Protein argonaute-2 protein, length: 859 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 15 3507
95 % 9 19 3235 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.7
PDBFlex
90 % 9 19 3281
70 % 12 24 2353
50 % 12 24 2329
40 % 12 24 2317
30 % 12 24 2213
Entity #2 | Chains: B
5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*U)-3' rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.