Sequence Similarity Clusters for the Entities in PDB 4OLA

Entity #1 | Chains: A
Protein argonaute-2 protein, length: 859 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 16 3237
95 % 10 21 3000 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.7
PDBFlex
90 % 10 21 3041
70 % 13 26 2293
50 % 13 26 2270
40 % 13 26 2260
30 % 13 26 2155
Entity #2 | Chains: B
5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*U)-3' rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures