Sequence Similarity Clusters for the Entities in PDB 4OL8

Entity #1 | Chains: A,B,E,F
Reverse transcriptase/ribonuclease H protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 18083
95 % 1 1 16600 Flexibility: High
Max RMSD: 16.3, Avg RMSD: 11.1
PDBFlex
90 % 1 1 16234
70 % 1 1 15107
50 % 1 1 13274
40 % 1 1 11878
30 % 1 1 10052
Entity #2 | Chains: C,G
5'-R(*CP*UP*GP*AP*GP*AP*GP*AP*GP*AP*GP*GP*AP*AP*GP*AP*UP*G)-3' rna, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D,H
5'-D(*CP*AP*TP*CP*TP*TP*CP*CP*TP*CP*TP*CP*TP*CP*TP*C)-3' dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures