Sequence Similarity Clusters for the Entities in PDB 4OL8

Entity #1 | Chains: A,B,E,F
Reverse transcriptase/ribonuclease H protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16868
95 % 1 1 15464 Flexibility: High
Max RMSD: 16.3, Avg RMSD: 11.1
PDBFlex
90 % 1 1 15166
70 % 1 1 14191
50 % 1 1 12559
40 % 1 1 11365
30 % 1 1 9870
Entity #2 | Chains: C,G
5'-R(*CP*UP*GP*AP*GP*AP*GP*AP*GP*AP*GP*GP*AP*AP*GP*AP*UP*G)-3' rna, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D,H
5'-D(*CP*AP*TP*CP*TP*TP*CP*CP*TP*CP*TP*CP*TP*CP*TP*C)-3' dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.