Sequence Similarity Clusters for the Entities in PDB 4NDH

Entity #1 | Chains: A,B
Aprataxin protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 11468
95 % 1 4 8249
90 % 1 4 8175
70 % 1 4 7829
50 % 1 4 7133
40 % 1 4 6584
30 % 1 4 5832
Entity #2 | Chains: D,E,G,H
5'-D(P*GP*TP*TP*CP*TP*AP*GP*AP*AP*C)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.