Sequence Similarity Clusters for the Entities in PDB 4N7H

Entity #1 | Chains: A
E3 ubiquitin-protein ligase NEDD4 protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 74950
95 % 2 2 25362 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.3
PDBFlex
90 % 2 2 24520
70 % 2 2 22282
50 % 2 36 1567
40 % 2 56 999
30 % 2 56 976
Entity #2 | Chains: B
Arrestin domain-containing protein 3 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4N7F 1 A, B E3 ubiquitin-protein ligase NEDD4 WW3 domain (UNP residues 841-874) 9606 6.3.2 | Details
2 4N7H 1 A E3 ubiquitin-protein ligase NEDD4 3rd WW domain (UNP residues 840-872) 9606 6.3.2 | Details
3 2N8S 1 A E3 ubiquitin-protein ligase NEDD4 WW1 Domain 10116 6.3.2 | Details
4 2N8T 1 A E3 ubiquitin-protein ligase NEDD4 WW2 Domain 10116 6.3.2 | Details
5 2N8U 1 A E3 ubiquitin-protein ligase NEDD4 WW2 Domain 10116 6.3.2 | Details
6 5AHT 1 A E3 UBIQUITIN-PROTEIN LIGASE NEDD4 WW3, UNP RESIDUES 838-877 9606
7 2MPT 1 A E3 ubiquitin-protein ligase NEDD4-like WW3 domain, UNP RESIDUES 496-539 9606 6.3.2 | Details
8 2M3O 1 W E3 ubiquitin-protein ligase NEDD4 third WW domain 9606 6.3.2 | Details
9 2LTV 1 A Yorkie homolog WW2 domain (UNP residues 230-265) 9606
10 2LTW 1 A Yorkie homolog WW1 domain (UNP residues 170-205) 9606
11 2LTX 1 A E3 ubiquitin-protein ligase SMURF1 WW2 domain (UNP residues 306-340) 9606 6.3.2 | Details
12 2LTY 1 A E3 ubiquitin-protein ligase NEDD4-like WW2 domain (UNP residues 385-417) 9606 6.3.2 | Details
13 2LTZ 1 A E3 ubiquitin-protein ligase SMURF2 WW3 domain (UNP residues 297-333) 9606 6.3.2 | Details
14 2LAW 1 A Yorkie homolog second WW domain, residues 230-263 9606
15 2LAX 1 A Yorkie homolog first WW domain, residues 170-205 9606
16 2LAY 1 A Yorkie homolog residues 170-205 9606
17 2LAZ 1 A E3 ubiquitin-protein ligase SMURF1 residues 235-267 9606 6.3.2 | Details
18 2LB0 1 A E3 ubiquitin-protein ligase SMURF1 residues 235-267 9606 6.3.2 | Details
19 2LB1 1 A E3 ubiquitin-protein ligase SMURF1 residues 305-339 9606 6.3.2 | Details
20 2LB2 1 A E3 ubiquitin-protein ligase NEDD4-like residues 386-420 9606 6.3.2 | Details
21 2LAJ 1 A E3 ubiquitin-protein ligase NEDD4-like WW 3 domain residues 496-535 9606 6.3.2 | Details
22 2KYK 1 A E3 ubiquitin-protein ligase Itchy homolog WW 2 domain 9606 6.3.2 | Details
23 2YSF 1 A E3 ubiquitin-protein ligase Itchy homolog WW domain, UNP residues 480-512 9606 6.3.2 | Details
24 2YSG 1 A Syntaxin-binding protein 4 WW domain, UNP residues 498-530 9606
25 2JOC 1 A Itchy E3 ubiquitin protein ligase WW 3 domain, sequence database residues 399-432 10090 6.3.2 | Details
26 2JO9 1 A Itchy E3 ubiquitin protein ligase WW 3 DOMAIN, SEQUENCE DATABASE RESIDUES 399-432 10090 6.3.2 | Details
27 2JMF 1 A E3 ubiquitin-protein ligase suppressor of deltex WW4 domain, residues 515-557 7227 6.3.2 | Details
28 2DJY 1 A Smad ubiquitination regulatory factor 2 WW3 domain 9606 6.3.2 | Details
29 1YIU 1 A Itchy E3 ubiquitin protein ligase WW3 10090 6.3.2 | Details
30 1WR7 1 A Nedd4-2 third WW domain 10090 6.3.2 | Details
31 1WR3 1 A ubiquitin-protein ligase Nedd4-2 first WW domain 10090 6.3.2 | Details
32 1WR4 1 A ubiquitin-protein ligase Nedd4-2 second WW domain 10090 6.3.2 | Details
33 1K9Q 1 A 65 kDa Yes-associated protein Wild type WW domain 9606
34 1K9R 1 A 65 kDa Yes-associated protein Wild type WW domain 9606
35 1K5R 1 A 65 KDA YES-ASSOCIATED PROTEIN 40-peptide construct with synthetic Amino-ethyl-sulfanyl-acetic acid link at position 24 WW domain, residues 5-44 9606
36 1E0M 1 A WWPROTOTYPE DOMAIN 32630