Sequence Similarity Clusters for the Entities in PDB 4N48

Entity #1 | Chains: A,B
Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 22811
95 % 3 3 20394 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 3 3 19809
70 % 3 3 18172
50 % 3 3 15770
40 % 3 3 13999
30 % 3 3 11764
Entity #2 | Chains: D,G
capped RNA rna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures