Sequence Similarity Clusters for the Entities in PDB 4MGU

Entity #1 | Chains: A
Structural protein VP2 protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54378
95 % 1 1 39710
90 % 1 1 37900
70 % 1 1 33660
50 % 1 1 28792
40 % 1 1 25469
30 % 2 2 15737
Entity #2 | Chains: C
DNA (5'-D(P*TP*TP*T)-3') dna, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures