Sequence Similarity Clusters for the Entities in PDB 4MGT

Entity #1 | Chains: A
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61699
95 % 14 18 3333 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.4
PDBFlex
90 % 14 18 3378
70 % 14 18 3342
50 % 14 18 3253
40 % 14 18 3164
30 % 14 18 2968
Entity #2 | Chains: B
DNA1 dna, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
DNA2 dna, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures