Sequence Similarity Clusters for the Entities in PDB 4MG2

Entity #1 | Chains: A
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62559
95 % 10 18 3394 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.4
PDBFlex
90 % 10 18 3440
70 % 10 18 3400
50 % 10 18 3312
40 % 10 18 3220
30 % 10 18 3014
Entity #2 | Chains: B
DNA-1 dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
DNA-2 dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures