Sequence Similarity Clusters for the Entities in PDB 4MG2

Entity #1 | Chains: A
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61344
95 % 10 18 3307 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.4
PDBFlex
90 % 10 18 3352
70 % 10 18 3317
50 % 10 18 3235
40 % 10 18 3148
30 % 10 18 2956
Entity #2 | Chains: B
DNA-1 dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
DNA-2 dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.