Sequence Similarity Clusters for the Entities in PDB 4MDX

Entity #1 | Chains: A,B
mRNA interferase EndoA protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 12244
95 % 1 3 9560
90 % 1 4 7032
70 % 1 4 6815
50 % 1 9 1963
40 % 1 9 1972
30 % 1 9 1891
Entity #2 | Chains: C
RNA, mRNA rna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.