Sequence Similarity Clusters for the Entities in PDB 4MDX

Entity #1 | Chains: A,B
mRNA interferase EndoA protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 12020
95 % 1 3 9376
90 % 1 4 6898
70 % 1 4 6694
50 % 1 9 1929
40 % 1 9 1943
30 % 1 9 1857
Entity #2 | Chains: C
RNA, mRNA rna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.