Sequence Similarity Clusters for the Entities in PDB 4MDE

Entity #1 | Chains: A,B
Metallophosphoesterase protein, length: 171 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 12888
95 % 4 10 3074
90 % 4 10 3118
70 % 4 10 3093
50 % 4 10 3020
40 % 4 10 2944
30 % 4 10 2758
Entity #2 | Chains: C,D
DNA (5'-D(P*CP*CP*TP*GP*T)-3') dna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.