Sequence Similarity Clusters for the Entities in PDB 4M9N

Entity #1 | Chains: A
DNA polymerase beta protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 8295
95 % 139 322 73 Flexibility: Low
Max RMSD: 14.0, Avg RMSD: 3.0
PDBFlex
90 % 139 322 76
70 % 139 322 89
50 % 139 322 127
40 % 139 322 143
30 % 218 452 102
Entity #2 | Chains: T
DNA Template Strand dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: P
DNA Primer Strand dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
DNA Downstream Strand dna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.