Sequence Similarity Clusters for the Entities in PDB 4M9E

Entity #1 | Chains: A
Krueppel-like factor 4 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 14266
95 % 2 9 7161
90 % 2 9 7131
70 % 2 10 6355
50 % 2 10 5903
40 % 15 181 222
30 % 16 193 222
Entity #2 | Chains: B
DNA (5'-D(*GP*AP*GP*GP*(5CM)P*GP*TP*GP*GP*C)-3') dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
DNA (5'-D(*GP*CP*CP*AP*(5CM)P*GP*CP*CP*TP*C)-3') dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2WBS 1 A KRUEPPEL-LIKE FACTOR 4 DNA-BINDING DOMAIN, RESIDUES 395-483 10090
2 4M9E 1 A Krueppel-like factor 4 UNP residues 396-483 10090
3 5KE6 1 A Krueppel-like factor 4 unp residues 396-483 10090
4 5KE7 1 A Krueppel-like factor 4 unp residues 396-483 10090
5 5KE9 1 A Krueppel-like factor 4 unp residues 396-483 10090
6 2WBU 1 A KRUEPPEL-LIKE FACTOR 4 RESIDUES 396-483 10090
7 5KE8 1 A Krueppel-like factor 4 unp residues 396-483 10090
8 5KEA 1 A Krueppel-like factor 4 unp residues 396-483 10090
9 5KEB 1 A Krueppel-like factor 4 unp residues 396-483 10090