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An Information Portal to 110071 Biological Macromolecular Structures

Structure of Klf4 zinc finger DNA binding domain in complex with methylated DNA
Sequence Clustering and Redundancy Reduction Results
4M9E
Sequence Clusters for the Sequence Entities in PDB 4M9E
Entity #1: Chains: A - Krueppel-like factor 4 protein, length: 88 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 23548
95% 2 3 19616
90% 2 3 19038
70% 2 3 17513
50% 2 3 15329
40% 11 166 222
30% 12 178 222
Entity #2: Chains: B - DNA (5'-D(*GP*AP*GP*GP*(5CM)P*GP*TP*GP*GP*C)-3') dna, length: 10 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - DNA (5'-D(*GP*CP*CP*AP*(5CM)P*GP*CP*CP*TP*C)-3') dna, length: 10 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.