POP-OUT | CLOSE

An Information Portal to 105339 Biological Macromolecular Structures

Structure of Klf4 zinc finger DNA binding domain in complex with methylated DNA
Sequence Clustering and Redundancy Reduction Results
4M9E
Sequence Clusters for the Sequence Entities in PDB 4M9E
Entity #1: Chains: A - Krueppel-like factor 4 protein, length: 88 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 22486
95% 2 3 18802
90% 2 3 18246
70% 2 3 16797
50% 2 3 14738
40% 10 160 208
30% 11 170 211
Entity #2: Chains: B - DNA (5'-D(*GP*AP*GP*GP*(5CM)P*GP*TP*GP*GP*C)-3') dna, length: 10 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - DNA (5'-D(*GP*CP*CP*AP*(5CM)P*GP*CP*CP*TP*C)-3') dna, length: 10 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.