POP-OUT | CLOSE

An Information Portal to 107049 Biological Macromolecular Structures

Structure of Klf4 zinc finger DNA binding domain in complex with methylated DNA
Sequence Clustering and Redundancy Reduction Results
4M9E
Sequence Clusters for the Sequence Entities in PDB 4M9E
Entity #1: Chains: A - Krueppel-like factor 4 protein, length: 88 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 22877
95% 2 3 19086
90% 2 3 18517
70% 2 3 17039
50% 2 3 14925
40% 10 160 227
30% 11 170 221
Entity #2: Chains: B - DNA (5'-D(*GP*AP*GP*GP*(5CM)P*GP*TP*GP*GP*C)-3') dna, length: 10 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - DNA (5'-D(*GP*CP*CP*AP*(5CM)P*GP*CP*CP*TP*C)-3') dna, length: 10 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.