Sequence Similarity Clusters for the Entities in PDB 4M95

Entity #1 | Chains: A
Gag-Pol polyprotein protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 27 1466
95 % 2 28 1884
90 % 2 28 1927
70 % 2 28 1942
50 % 2 28 1966
40 % 2 28 1965
30 % 2 28 1896
Entity #2 | Chains: B
5' d(ATCCGTTA) 3' dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: G
5' d(TAACGGAT) 3' dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures