Sequence Similarity Clusters for the Entities in PDB 4M94

Entity #1 | Chains: A
Gag-Pol polyprotein protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 26 1206
95 % 13 27 1595
90 % 13 27 1630
70 % 13 27 1657
50 % 13 27 1699
40 % 13 27 1722
30 % 13 27 1661
Entity #2 | Chains: B
5' d(ATCCGttA) 3' dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: G
5' d(TAACGGAT) 3' dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.