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Crystal structure of Lsm1-7 complex
Sequence Clustering and Redundancy Reduction Results
4M75
Sequence Clusters for the Sequence Entities in PDB 4M75
Entity #1: Chains: A,H - U6 snRNA-associated Sm-like protein Lsm1 protein, length: 144 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 23042
95% 2 2 19257
90% 2 2 18672
70% 2 2 17184
50% 2 2 15035
40% 2 2 13476
30% 2 2 11565
Entity #2: Chains: B,I - U6 snRNA-associated Sm-like protein Lsm2 protein, length: 95 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 5 5287
95% 5 5 5880
90% 5 5 5863
70% 5 5 5733
50% 5 5 5343
40% 5 5 4998
30% 5 5 4504
Entity #3: Chains: C,J - U6 snRNA-associated Sm-like protein Lsm3 protein, length: 89 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 5 5302
95% 7 9 2864
90% 7 9 2907
70% 7 9 2911
50% 7 9 2866
40% 7 9 2789
30% 7 9 2605
Entity #4: Chains: D,K - U6 snRNA-associated Sm-like protein Lsm6 protein, length: 86 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 7 4294
95% 6 7 4884
90% 6 7 4895
70% 6 7 4812
50% 6 7 4551
40% 6 7 4284
30% 6 7 3885
Entity #5: Chains: E,L - U6 snRNA-associated Sm-like protein Lsm5 protein, length: 93 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 7 4285
95% 6 7 4874
90% 6 7 4886
70% 6 7 4805
50% 6 7 4542
40% 6 7 4276
30% 6 7 3878
Entity #6: Chains: F,M - U6 snRNA-associated Sm-like protein Lsm7 protein, length: 115 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 7 4251
95% 6 7 4843
90% 6 7 4857
70% 6 7 4775
50% 6 7 4514
40% 6 7 4252
30% 6 7 3853
Entity #7: Chains: G,N - U6 snRNA-associated Sm-like protein Lsm4 protein, length: 122 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 37140
95% 1 1 27945
90% 1 1 26839
70% 1 1 24110
50% 1 1 20778
40% 1 1 18378
30% 1 1 15594
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.