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Crystal structure of Lsm1-7 complex
Sequence Clustering and Redundancy Reduction Results
4M75
Sequence Clusters for the Sequence Entities in PDB 4M75
Entity #1: Chains: A,H - U6 snRNA-associated Sm-like protein Lsm1 protein, length: 144 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 22003
95% 2 2 18435
90% 2 2 17884
70% 2 2 16477
50% 2 2 14439
40% 2 2 12949
30% 2 2 11131
Entity #2: Chains: B,I - U6 snRNA-associated Sm-like protein Lsm2 protein, length: 95 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 5 5010
95% 5 5 5604
90% 5 5 5607
70% 5 5 5494
50% 5 5 5145
40% 5 5 4812
30% 5 5 4345
Entity #3: Chains: C,J - U6 snRNA-associated Sm-like protein Lsm3 protein, length: 89 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 5 5029
95% 7 9 2728
90% 7 9 2764
70% 7 9 2761
50% 7 9 2748
40% 7 9 2688
30% 7 9 2497
Entity #4: Chains: D,K - U6 snRNA-associated Sm-like protein Lsm6 protein, length: 86 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 7 4047
95% 6 7 4614
90% 6 7 4628
70% 6 7 4572
50% 6 7 4372
40% 6 7 4116
30% 6 7 3742
Entity #5: Chains: E,L - U6 snRNA-associated Sm-like protein Lsm5 protein, length: 93 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 7 4040
95% 6 7 4604
90% 6 7 4619
70% 6 7 4565
50% 6 7 4363
40% 6 7 4108
30% 6 7 3735
Entity #6: Chains: F,M - U6 snRNA-associated Sm-like protein Lsm7 protein, length: 115 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 7 4007
95% 6 7 4576
90% 6 7 4593
70% 6 7 4537
50% 6 7 4337
40% 6 7 4085
30% 6 7 3711
Entity #7: Chains: G,N - U6 snRNA-associated Sm-like protein Lsm4 protein, length: 122 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 35447
95% 1 1 26734
90% 1 1 25711
70% 1 1 23183
50% 1 1 20028
40% 1 1 17723
30% 1 1 15060
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.