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An Information Portal to 107049 Biological Macromolecular Structures

Crystal structure of Lsm1-7 complex
Sequence Clustering and Redundancy Reduction Results
4M75
Sequence Clusters for the Sequence Entities in PDB 4M75
Entity #1: Chains: A,H - U6 snRNA-associated Sm-like protein Lsm1 protein, length: 144 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 22221
95% 2 2 18583
90% 2 2 18024
70% 2 2 16600
50% 2 2 14532
40% 2 2 13035
30% 2 2 11194
Entity #2: Chains: B,I - U6 snRNA-associated Sm-like protein Lsm2 protein, length: 95 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 5 5067
95% 5 5 5666
90% 5 5 5669
70% 5 5 5543
50% 5 5 5174
40% 5 5 4842
30% 5 5 4369
Entity #3: Chains: C,J - U6 snRNA-associated Sm-like protein Lsm3 protein, length: 89 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 5 5086
95% 7 9 2766
90% 7 9 2801
70% 7 9 2800
50% 7 9 2771
40% 7 9 2706
30% 7 9 2514
Entity #4: Chains: D,K - U6 snRNA-associated Sm-like protein Lsm6 protein, length: 86 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 7 4093
95% 6 7 4659
90% 6 7 4673
70% 6 7 4616
50% 6 7 4398
40% 6 7 4142
30% 6 7 3762
Entity #5: Chains: E,L - U6 snRNA-associated Sm-like protein Lsm5 protein, length: 93 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 7 4086
95% 6 7 4649
90% 6 7 4664
70% 6 7 4609
50% 6 7 4389
40% 6 7 4134
30% 6 7 3755
Entity #6: Chains: F,M - U6 snRNA-associated Sm-like protein Lsm7 protein, length: 115 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 7 4053
95% 6 7 4620
90% 6 7 4637
70% 6 7 4580
50% 6 7 4362
40% 6 7 4111
30% 6 7 3731
Entity #7: Chains: G,N - U6 snRNA-associated Sm-like protein Lsm4 protein, length: 122 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 35760
95% 1 1 26934
90% 1 1 25900
70% 1 1 23344
50% 1 1 20154
40% 1 1 17837
30% 1 1 15150
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.