Sequence Similarity Clusters for the Entities in PDB 4M6F

Entity #1 | Chains: A
DNA-invertase protein, length: 193 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59316
95 % 2 2 33931 Flexibility: Medium
Max RMSD: 4.5, Avg RMSD: 4.5
PDBFlex
90 % 2 2 32449
70 % 2 2 28969
50 % 2 2 24747
40 % 8 8 3464
30 % 9 9 2719
Entity #2 | Chains: B
gix site analog dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
gix site analog dna, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures