Sequence Similarity Clusters for the Entities in PDB 4M6D

Entity #1 | Chains: A,C,E,G,I,K
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 518 583 3
95 % 569 636 4
90 % 581 653 5
70 % 790 868 6
50 % 797 877 6
40 % 826 911 10
30 % 826 911 17
Entity #2 | Chains: B,D,F,H,J,L
aptamer rna, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.