Sequence Similarity Clusters for the Entities in PDB 4M4O

Entity #1 | Chains: A
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 481 665 3
95 % 530 718 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 539 735 5
70 % 730 955 7
50 % 734 963 8
40 % 746 997 11
30 % 746 997 20
Entity #2 | Chains: B
RNA (59-MER) rna, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures