Sequence Similarity Clusters for the Entities in PDB 4M41

Entity #1 | Chains: A
DNA polymerase protein, length: 903 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 27 2084
95 % 64 120 244 Flexibility: Medium
Max RMSD: 7.3, Avg RMSD: 3.3
PDBFlex
90 % 64 120 253
70 % 64 120 286
50 % 64 120 328
40 % 64 120 365
30 % 64 120 362
Entity #2 | Chains: T
DNA template dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: P
DNA primer dna, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4M3Z 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
2 4FJL 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
3 4M3Y 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
4 4M3T 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
5 4FJ7 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
6 4M45 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
7 4FK4 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
8 4FK2 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
9 4FJJ 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
10 4FJK 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
11 4FJ9 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
12 4FJN 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
13 4M3U 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
14 4M42 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
15 4M3R 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
16 4FJ5 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
17 4M3W 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
18 4FJH 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
19 4FJX 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
20 3SPY 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
21 4FJG 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
22 4M41 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
23 4M3X 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
24 4FK0 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
25 4FJ8 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
26 4FJI 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details
27 3SPZ 1 A DNA polymerase 1914161 2.7.7.7 | Details 3.1.11 | Details