Sequence Similarity Clusters for the Entities in PDB 4M41

Entity #1 | Chains: A
DNA polymerase protein, length: 903 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 27 1625
95 % 64 120 223 Flexibility: Medium
Max RMSD: 7.3, Avg RMSD: 3.3
PDBFlex
90 % 64 120 231
70 % 64 120 261
50 % 64 120 279
40 % 64 120 299
30 % 64 120 307
Entity #2 | Chains: T
DNA template dna, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: P
DNA primer dna, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.