Sequence Similarity Clusters for the Entities in PDB 4LUP

Entity #1 | Chains: A,C
RNA polymerase sigma factor protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24191
95 % 1 3 20662
90 % 1 3 20083
70 % 1 3 18452
50 % 1 3 16016
40 % 1 3 14270
30 % 1 3 12214
Entity #2 | Chains: B,D
region 2 of sigmaE of E. coli dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures