Sequence Similarity Clusters for the Entities in PDB 4LQ3

Entity #1 | Chains: A
RNA-dependent RNA-polymerase protein, length: 526 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 11345
95 % 12 13 3605 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 12 13 3678
70 % 12 13 3612
50 % 21 23 1178
40 % 21 23 1176
30 % 23 27 1068
Entity #2 | Chains: R
5'-R(P*GP*G)-3' rna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures