Sequence Similarity Clusters for the Entities in PDB 4LQ3

Entity #1 | Chains: A
RNA-dependent RNA-polymerase protein, length: 526 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 10054
95 % 12 13 3394 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 12 13 3446
70 % 12 13 3411
50 % 21 23 1110
40 % 21 23 1123
30 % 23 27 1008
Entity #2 | Chains: R
5'-R(P*GP*G)-3' rna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.