Sequence Similarity Clusters for the Entities in PDB 4LJ0

Entity #1 | Chains: A,B
Nab2 protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49511
95 % 1 1 36945 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.1
PDBFlex
90 % 1 1 35263
70 % 1 1 31332
50 % 1 1 26769
40 % 1 1 23622
30 % 1 1 20030
Entity #2 | Chains: C,D,E
polyadenosine RNA rna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures