Sequence Similarity Clusters for the Entities in PDB 4LJ0

Entity #1 | Chains: A,B
Nab2 protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44906
95 % 1 1 37461 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.1
PDBFlex
90 % 1 1 35743
70 % 1 1 29620
50 % 1 1 24391
40 % 1 1 21450
30 % 1 1 17896
Entity #2 | Chains: C,D,E
polyadenosine RNA rna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures