Sequence Similarity Clusters for the Entities in PDB 4LGT

Entity #1 | Chains: A,D
Ribosomal large subunit pseudouridine synthase B protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28092
95 % 1 2 23442 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.8
PDBFlex
90 % 1 2 22733
70 % 1 2 20828
50 % 1 2 18015
40 % 1 2 16050
30 % 1 2 13726
Entity #2 | Chains: E,F
stem-loop of 23S rRNA rna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures