Sequence Similarity Clusters for the Entities in PDB 4LGT

Entity #1 | Chains: A,D
Ribosomal large subunit pseudouridine synthase B protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26445
95 % 1 2 22092 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.8
PDBFlex
90 % 1 2 21461
70 % 1 2 19748
50 % 1 2 17134
40 % 1 2 15289
30 % 1 2 13073
Entity #2 | Chains: E,F
stem-loop of 23S rRNA rna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.