Sequence Similarity Clusters for the Entities in PDB 4LDX

Entity #1 | Chains: A,B
Auxin response factor 1 protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44136
95 % 4 4 11522 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.8
PDBFlex
90 % 4 4 11356
70 % 4 4 10757
50 % 4 4 9804
40 % 4 4 8873
30 % 4 4 7659
Entity #2 | Chains: C
ER7, forward sequence dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D
ER7, reverse sequence dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4LDX 1 A, B Auxin response factor 1 DNA Binding Domain, UNP residues 1-355 3702