Sequence Similarity Clusters for the Entities in PDB 4LDX

Entity #1 | Chains: A,B
Auxin response factor 1 protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14382
95 % 4 4 9983 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.8
PDBFlex
90 % 4 4 9873
70 % 4 4 9376
50 % 4 4 8510
40 % 4 4 7803
30 % 4 4 6890
Entity #2 | Chains: C
ER7, forward sequence dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D
ER7, reverse sequence dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.