Sequence Similarity Clusters for the Entities in PDB 4LDX

Entity #1 | Chains: A,B
Auxin response factor 1 protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43775
95 % 4 4 11415 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.8
PDBFlex
90 % 4 4 11256
70 % 4 4 10644
50 % 4 4 9715
40 % 4 4 8796
30 % 4 4 7587
Entity #2 | Chains: C
ER7, forward sequence dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D
ER7, reverse sequence dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures