Sequence Similarity Clusters for the Entities in PDB 4LD0

Entity #1 | Chains: A,B
Crossover junction endodeoxyribonuclease RuvC protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38777
95 % 3 3 13101
90 % 3 3 12856
70 % 3 3 12094
50 % 3 3 10827
40 % 3 3 9850
30 % 4 4 5249
Entity #2 | Chains: C
DNA 31-MER dna, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D
DNA 13-MER dna, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: F
DNA 11-MER dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.