Sequence Similarity Clusters for the Entities in PDB 4LCK

Entity #1 | Chains: A,D
Ribosomal protein YbxF protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 6193
95 % 2 6 6344 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 6 6334
70 % 2 6 6164
50 % 2 6 5766
40 % 2 6 5371
30 % 2 6 4729
Entity #2 | Chains: B,E
tRNA-Gly rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C,F
T-BOX RIBOSWITCH STEM I rna, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures