Sequence Similarity Clusters for the Entities in PDB 4LCK

Entity #1 | Chains: A,D
Ribosomal protein YbxF protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 5231
95 % 2 6 5872 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 2 6 5865
70 % 2 6 5739
50 % 2 6 5389
40 % 2 6 5070
30 % 2 6 4560
Entity #2 | Chains: B,E
tRNA-Gly rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C,F
T-BOX RIBOSWITCH STEM I rna, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.