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An Information Portal to 111749 Biological Macromolecular Structures

Structure of mrna stem-loop, human stem-loop binding protein and 3'hexo ternary complex
Sequence Clustering and Redundancy Reduction Results
4L8R
Sequence Clusters for the Sequence Entities in PDB 4L8R
Entity #1: Chains: A,D - HISTONE MRNA STEM-LOOP rna, length: 26 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: B,E - 3'-5' exoribonuclease 1 protein, length: 303 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 15560
95% 2 3 7155
90% 2 3 7109
70% 2 3 6875
50% 2 3 6299
40% 2 3 5846
30% 2 3 5223
Entity #3: Chains: C - Histone RNA hairpin-binding protein protein, length: 120 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 37607
95% 2 2 28280
90% 2 2 27143
70% 2 2 24363
50% 2 2 20992
40% 2 2 18564
30% 2 2 15750
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.