Sequence Similarity Clusters for the Entities in PDB 4L62

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Transcriptional regulator protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 3350
95 % 2 2 3647 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 2 2 3720
70 % 2 2 3649
50 % 2 2 3574
40 % 4 4 2581
30 % 4 4 2419
Entity #2 | Chains: Q,S,U,W
DNA (25-MER) dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: R,T,V,X
DNA (25-MER) dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures