Sequence Similarity Clusters for the Entities in PDB 4L62

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Transcriptional regulator protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 3423
95 % 2 2 3723 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 2 2 3795
70 % 2 2 3716
50 % 2 2 3631
40 % 4 4 2626
30 % 4 4 2454
Entity #2 | Chains: Q,S,U,W
DNA (25-MER) dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: R,T,V,X
DNA (25-MER) dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures