Sequence Similarity Clusters for the Entities in PDB 4KZZ

Entity #1 | Chains: A
40S Ribosomal Protein SA protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24602
95 % 1 23 2446
90 % 1 23 2494
70 % 1 23 2476
50 % 26 70 498
40 % 28 72 503
30 % 28 72 502
Entity #10 | Chains: J
40S Ribosomal Protein S9 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1319
95 % 1 29 1807
90 % 1 29 1849
70 % 32 93 313
50 % 32 94 348
40 % 32 98 358
30 % 32 98 361
Entity #11 | Chains: K
40S Ribosomal Protein S10 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2112
95 % 1 23 2472
90 % 1 23 2521
70 % 1 23 2501
50 % 1 24 2358
40 % 1 25 2195
30 % 1 25 2098
Entity #12 | Chains: L
40S Ribosomal Protein S11 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1266
95 % 1 30 1742
90 % 1 30 1781
70 % 30 84 359
50 % 32 93 355
40 % 32 93 385
30 % 32 93 387
Entity #13 | Chains: M
40S Ribosomal Protein S12 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 23 1900
95 % 1 29 1816
90 % 1 29 1858
70 % 1 29 1881
50 % 30 80 450
40 % 30 85 462
30 % 32 88 424
Entity #14 | Chains: N
40S Ribosomal Protein S13 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1323
95 % 1 29 1810
90 % 1 29 1852
70 % 30 85 355
50 % 32 91 368
40 % 32 95 377
30 % 32 95 378
Entity #15 | Chains: O
40S Ribosomal Protein S14 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 22 2007
95 % 1 22 2624
90 % 1 23 2525
70 % 32 89 324
50 % 34 95 324
40 % 321 487 18
30 % 321 487 31
Entity #16 | Chains: P
40S Ribosomal Protein S15 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 5295
95 % 1 24 2368
90 % 1 24 2420
70 % 1 26 2149
50 % 31 89 405
40 % 33 95 380
30 % 33 95 384
Entity #17 | Chains: Q
40S Ribosomal Protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1270
95 % 1 30 1748
90 % 1 30 1789
70 % 1 32 1674
50 % 32 96 339
40 % 32 100 352
30 % 319 488 33
Entity #18 | Chains: R
40S Ribosomal Protein S17 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1324
95 % 1 29 1814
90 % 1 29 1856
70 % 1 30 1816
50 % 33 92 369
40 % 33 92 401
30 % 33 92 399
Entity #19 | Chains: S
40S Ribosomal Protein S18 protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1268
95 % 1 30 1745
90 % 1 30 1784
70 % 30 85 354
50 % 32 94 349
40 % 32 98 359
30 % 322 491 32
Entity #2 | Chains: B
40S Ribosomal Protein S3A protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24941
95 % 1 23 2455
90 % 1 23 2504
70 % 1 23 2486
50 % 27 70 475
40 % 27 71 510
30 % 27 71 513
Entity #20 | Chains: T
40S Ribosomal Protein S19 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 21078
95 % 1 29 1811
90 % 1 29 1853
70 % 1 29 1879
50 % 30 84 417
40 % 31 89 431
30 % 33 92 393
Entity #21 | Chains: U
40S Ribosomal Protein S20 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 22 2017
95 % 1 24 2391
90 % 1 24 2443
70 % 1 25 2228
50 % 32 90 377
40 % 32 96 371
30 % 325 490 29
Entity #22 | Chains: V
40S Ribosomal Protein S21 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 22403
95 % 1 29 1823
90 % 1 29 1865
70 % 1 30 1830
50 % 29 84 425
40 % 29 84 465
30 % 29 84 457
Entity #23 | Chains: W
40S Ribosomal Protein S15A protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1273
95 % 1 30 1751
90 % 1 30 1792
70 % 33 97 306
50 % 34 102 320
40 % 34 102 345
30 % 326 500 28
Entity #24 | Chains: X
40S Ribosomal Protein S23 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 1422
95 % 1 32 1608
90 % 1 33 1558
70 % 32 99 297
50 % 32 103 318
40 % 32 103 340
30 % 32 103 350
Entity #25 | Chains: Y
40S Ribosomal Protein S24 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 21391
95 % 1 29 1815
90 % 1 29 1857
70 % 1 30 1818
50 % 29 89 406
40 % 29 89 437
30 % 29 89 434
Entity #26 | Chains: Z
40S Ribosomal Protein S25 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 23 1902
95 % 1 23 2483
90 % 1 23 2534
70 % 1 24 2421
50 % 26 69 508
40 % 26 71 531
30 % 26 71 535
Entity #27 | Chains: a
40S Ribosomal Protein S26 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27085
95 % 1 22 2640
90 % 1 22 2684
70 % 1 23 2515
50 % 2 44 1184
40 % 4 46 1049
30 % 4 46 1035
Entity #28 | Chains: b
40S Ribosomal Protein S27 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1331
95 % 1 29 1822
90 % 1 29 1864
70 % 29 85 361
50 % 31 89 384
40 % 31 89 416
30 % 31 89 416
Entity #29 | Chains: c
40S Ribosomal Protein S28 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 26 1582
95 % 1 26 2108
90 % 1 29 1867
70 % 30 89 340
50 % 32 96 341
40 % 32 96 372
30 % 32 96 373
Entity #3 | Chains: C
40S Ribosomal Protein S2 protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24774
95 % 1 3 20771
90 % 1 21 2754
70 % 1 22 2603
50 % 26 69 506
40 % 26 69 541
30 % 26 69 542
Entity #30 | Chains: d
40S Ribosomal Protein S29 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1293
95 % 1 30 1768
90 % 1 30 1808
70 % 30 85 356
50 % 32 93 357
40 % 32 93 387
30 % 32 93 389
Entity #31 | Chains: e
40S Ribosomal Protein S30 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 5309
95 % 1 13 4749
90 % 1 13 4770
70 % 1 13 4707
50 % 1 14 4248
40 % 1 14 4055
30 % 1 14 3733
Entity #32 | Chains: f
40S Ribosomal Protein S27A protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2114
95 % 1 21 2735
90 % 1 21 2781
70 % 2 40 1247
50 % 2 40 1291
40 % 2 41 1278
30 % 2 41 1255
Entity #33 | Chains: g
40S Ribosomal Protein RACK1 protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 31 1078
95 % 2 31 1510
90 % 2 31 1544
70 % 3 33 1472
50 % 37 93 337
40 % 39 95 342
30 % 39 95 352
Entity #34 | Chains: i
18S Ribosomal RNA rna, length: 1863 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #35 | Chains: j
initiator Met-RNA-i rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #36 | Chains: k
mRNA rna, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #37 | Chains: n
human initiation factor eIF1A protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26665
95 % 1 3 22129
90 % 1 3 21422
70 % 1 3 19640
50 % 1 8 7610
40 % 1 8 6990
30 % 1 8 6174
Entity #4 | Chains: D
40S Ribosomal Protein S3 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 15 3336
95 % 1 30 1726
90 % 1 30 1764
70 % 31 90 330
50 % 31 91 387
40 % 33 93 383
30 % 33 96 370
Entity #5 | Chains: E
40S Ribosomal Protein S4X protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 18493
95 % 1 22 2579
90 % 1 29 1835
70 % 29 83 369
50 % 31 91 372
40 % 31 91 405
30 % 31 95 382
Entity #6 | Chains: F
40S Ribosomal Protein S5 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1259
95 % 1 30 1733
90 % 1 30 1771
70 % 30 91 328
50 % 32 97 335
40 % 33 102 343
30 % 33 102 353
Entity #7 | Chains: G
40S Ribosomal Protein S6 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 1389
95 % 1 29 1796
90 % 1 29 1838
70 % 1 30 1786
50 % 29 87 412
40 % 29 87 448
30 % 29 87 443
Entity #8 | Chains: H
40S Ribosomal Protein S7 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1318
95 % 1 29 1806
90 % 1 29 1848
70 % 1 30 1801
50 % 29 82 433
40 % 29 86 453
30 % 31 90 414
Entity #9 | Chains: I
40S Ribosomal Protein S8 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 19791
95 % 1 29 1802
90 % 1 29 1844
70 % 1 29 1872
50 % 31 90 382
40 % 31 90 415
30 % 31 90 413

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.