Sequence Similarity Clusters for the Entities in PDB 4KZZ

Entity #1 | Chains: A
40S Ribosomal Protein SA protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25183
95 % 1 25 2186
90 % 1 25 2254
70 % 1 25 2257
50 % 27 75 482
40 % 29 77 498
30 % 29 77 498
Entity #10 | Chains: J
40S Ribosomal Protein S9 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 31 1250
95 % 1 31 1699
90 % 1 31 1730
70 % 33 99 306
50 % 33 101 337
40 % 33 105 347
30 % 33 105 352
Entity #11 | Chains: K
40S Ribosomal Protein S10 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 23 1953
95 % 1 25 2211
90 % 1 25 2278
70 % 1 25 2277
50 % 1 26 2186
40 % 1 27 2103
30 % 1 27 2009
Entity #12 | Chains: L
40S Ribosomal Protein S11 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1203
95 % 1 32 1653
90 % 1 32 1682
70 % 31 90 346
50 % 33 100 341
40 % 33 100 370
30 % 33 100 378
Entity #13 | Chains: M
40S Ribosomal Protein S12 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 23 1960
95 % 1 31 1713
90 % 1 31 1746
70 % 1 31 1776
50 % 31 84 440
40 % 31 89 459
30 % 33 92 426
Entity #14 | Chains: N
40S Ribosomal Protein S13 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 31 1253
95 % 1 31 1704
90 % 1 31 1736
70 % 31 92 340
50 % 33 98 358
40 % 33 102 361
30 % 33 102 369
Entity #15 | Chains: O
40S Ribosomal Protein S14 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 24 1862
95 % 1 24 2433
90 % 1 25 2281
70 % 33 96 318
50 % 35 102 318
40 % 322 499 19
30 % 322 499 33
Entity #16 | Chains: P
40S Ribosomal Protein S15 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 5456
95 % 1 26 2144
90 % 1 26 2209
70 % 1 28 2039
50 % 32 93 404
40 % 34 99 387
30 % 34 99 388
Entity #17 | Chains: Q
40S Ribosomal Protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1210
95 % 1 32 1659
90 % 1 32 1687
70 % 1 34 1592
50 % 33 102 336
40 % 33 106 345
30 % 320 499 35
Entity #18 | Chains: R
40S Ribosomal Protein S17 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 31 1256
95 % 1 31 1710
90 % 1 31 1743
70 % 1 32 1725
50 % 34 96 374
40 % 34 96 403
30 % 34 96 407
Entity #19 | Chains: S
40S Ribosomal Protein S18 protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1209
95 % 1 32 1658
90 % 1 32 1686
70 % 31 88 361
50 % 33 98 357
40 % 33 102 362
30 % 323 500 36
Entity #2 | Chains: B
40S Ribosomal Protein S3A protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25536
95 % 1 25 2192
90 % 1 25 2259
70 % 1 25 2264
50 % 28 76 470
40 % 28 78 499
30 % 28 78 500
Entity #20 | Chains: T
40S Ribosomal Protein S19 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 21578
95 % 1 31 1705
90 % 1 31 1737
70 % 1 31 1773
50 % 31 87 424
40 % 32 92 434
30 % 34 95 406
Entity #21 | Chains: U
40S Ribosomal Protein S20 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 24 1883
95 % 1 26 2154
90 % 1 26 2221
70 % 1 27 2136
50 % 33 95 375
40 % 33 100 375
30 % 327 500 32
Entity #22 | Chains: V
40S Ribosomal Protein S21 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 22928
95 % 1 31 1722
90 % 1 31 1756
70 % 1 32 1737
50 % 30 88 426
40 % 30 88 460
30 % 30 88 453
Entity #23 | Chains: W
40S Ribosomal Protein S15A protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1215
95 % 1 32 1662
90 % 1 32 1690
70 % 34 104 296
50 % 35 109 315
40 % 35 109 338
30 % 327 512 30
Entity #24 | Chains: X
40S Ribosomal Protein S23 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1333
95 % 1 34 1530
90 % 1 35 1500
70 % 33 106 290
50 % 33 110 313
40 % 33 110 332
30 % 33 110 341
Entity #25 | Chains: Y
40S Ribosomal Protein S24 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 21901
95 % 1 31 1712
90 % 1 31 1745
70 % 1 32 1726
50 % 30 96 394
40 % 30 96 420
30 % 30 96 422
Entity #26 | Chains: Z
40S Ribosomal Protein S25 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 1673
95 % 1 25 2222
90 % 1 25 2288
70 % 1 26 2222
50 % 27 72 501
40 % 27 74 530
30 % 27 74 531
Entity #27 | Chains: a
40S Ribosomal Protein S26 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27749
95 % 1 24 2461
90 % 1 24 2512
70 % 1 25 2287
50 % 2 48 1101
40 % 4 50 1009
30 % 4 50 985
Entity #28 | Chains: b
40S Ribosomal Protein S27 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 31 1262
95 % 1 31 1720
90 % 1 31 1754
70 % 30 91 350
50 % 32 96 377
40 % 32 96 404
30 % 32 96 408
Entity #29 | Chains: c
40S Ribosomal Protein S28 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 1505
95 % 1 28 2011
90 % 1 31 1758
70 % 31 94 333
50 % 33 101 338
40 % 33 101 367
30 % 33 101 374
Entity #3 | Chains: C
40S Ribosomal Protein S2 protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25360
95 % 1 3 21244
90 % 1 23 2567
70 % 1 24 2394
50 % 27 74 488
40 % 27 74 527
30 % 27 74 527
Entity #30 | Chains: d
40S Ribosomal Protein S29 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1229
95 % 1 32 1673
90 % 1 32 1702
70 % 31 88 363
50 % 33 97 366
40 % 33 97 396
30 % 33 97 395
Entity #31 | Chains: e
40S Ribosomal Protein S30 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 5471
95 % 1 14 4585
90 % 1 14 4598
70 % 1 14 4496
50 % 1 15 4042
40 % 1 15 3872
30 % 1 15 3569
Entity #32 | Chains: f
40S Ribosomal Protein S27A protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 23 1955
95 % 1 23 2549
90 % 1 23 2602
70 % 2 43 1187
50 % 2 43 1237
40 % 2 44 1224
30 % 2 44 1198
Entity #33 | Chains: g
40S Ribosomal Protein RACK1 protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 33 1064
95 % 2 33 1460
90 % 2 33 1484
70 % 3 35 1401
50 % 38 97 340
40 % 40 99 344
30 % 40 99 350
Entity #34 | Chains: i
18S Ribosomal RNA rna, length: 1863 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #35 | Chains: j
initiator Met-RNA-i rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #36 | Chains: k
mRNA rna, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #37 | Chains: n
human initiation factor eIF1A protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27316
95 % 1 3 22660
90 % 1 3 21937
70 % 1 3 20098
50 % 1 8 7786
40 % 1 8 7145
30 % 1 8 6305
Entity #4 | Chains: D
40S Ribosomal Protein S3 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 15 3412
95 % 1 32 1633
90 % 1 32 1661
70 % 32 93 335
50 % 32 95 391
40 % 34 97 391
30 % 34 100 377
Entity #5 | Chains: E
40S Ribosomal Protein S4X protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 18948
95 % 1 24 2358
90 % 1 31 1721
70 % 30 89 358
50 % 32 98 364
40 % 32 98 390
30 % 32 102 373
Entity #6 | Chains: F
40S Ribosomal Protein S5 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1197
95 % 1 32 1645
90 % 1 32 1675
70 % 31 96 326
50 % 33 103 332
40 % 34 108 340
30 % 34 108 345
Entity #7 | Chains: G
40S Ribosomal Protein S6 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1313
95 % 1 31 1693
90 % 1 31 1722
70 % 1 32 1696
50 % 30 93 403
40 % 30 93 431
30 % 30 93 435
Entity #8 | Chains: H
40S Ribosomal Protein S7 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 31 1249
95 % 1 31 1698
90 % 1 31 1729
70 % 1 32 1710
50 % 30 88 422
40 % 30 92 437
30 % 32 97 400
Entity #9 | Chains: I
40S Ribosomal Protein S8 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 20284
95 % 1 31 1697
90 % 1 31 1728
70 % 1 31 1763
50 % 32 97 370
40 % 32 97 401
30 % 32 97 399

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.