Sequence Similarity Clusters for the Entities in PDB 4KZZ

Entity #1 | Chains: A
40S Ribosomal Protein SA protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26196
95 % 2 27 1689
90 % 2 27 1727
70 % 2 27 1750
50 % 28 79 462
40 % 30 81 476
30 % 30 81 474
Entity #10 | Chains: J
40S Ribosomal Protein S9 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 33 1011
95 % 2 33 1393
90 % 2 33 1417
70 % 36 104 290
50 % 36 107 321
40 % 36 111 327
30 % 36 111 338
Entity #11 | Chains: K
40S Ribosomal Protein S10 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 25 1392
95 % 2 27 1723
90 % 2 27 1758
70 % 2 27 1782
50 % 2 28 1735
40 % 2 29 1689
30 % 2 29 1655
Entity #12 | Chains: L
40S Ribosomal Protein S11 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 34 987
95 % 2 34 1351
90 % 2 34 1372
70 % 34 94 331
50 % 36 106 327
40 % 36 106 348
30 % 36 106 356
Entity #13 | Chains: M
40S Ribosomal Protein S12 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 25 1398
95 % 2 33 1403
90 % 2 33 1427
70 % 2 33 1424
50 % 34 88 422
40 % 34 94 431
30 % 36 97 407
Entity #14 | Chains: N
40S Ribosomal Protein S13 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 33 1020
95 % 2 33 1399
90 % 2 33 1423
70 % 34 101 305
50 % 36 104 333
40 % 36 108 337
30 % 36 108 345
Entity #15 | Chains: O
40S Ribosomal Protein S14 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 26 1312
95 % 2 26 1773
90 % 2 27 1764
70 % 36 101 298
50 % 38 116 287
40 % 327 536 19
30 % 327 536 31
Entity #16 | Chains: P
40S Ribosomal Protein S15 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 5693
95 % 2 28 1635
90 % 2 28 1671
70 % 2 32 1459
50 % 35 98 381
40 % 37 105 354
30 % 37 105 361
Entity #17 | Chains: Q
40S Ribosomal Protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 34 990
95 % 2 34 1354
90 % 2 34 1375
70 % 2 37 1293
50 % 36 108 318
40 % 36 112 324
30 % 325 523 35
Entity #18 | Chains: R
40S Ribosomal Protein S17 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 33 1021
95 % 2 33 1401
90 % 2 33 1425
70 % 2 34 1389
50 % 39 104 344
40 % 39 104 369
30 % 39 104 371
Entity #19 | Chains: S
40S Ribosomal Protein S18 protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 34 989
95 % 2 34 1353
90 % 2 34 1374
70 % 34 92 342
50 % 36 103 335
40 % 36 108 338
30 % 328 526 34
Entity #2 | Chains: B
40S Ribosomal Protein S3A protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26560
95 % 2 27 1700
90 % 2 27 1737
70 % 2 27 1759
50 % 29 79 448
40 % 29 81 480
30 % 29 82 475
Entity #20 | Chains: T
40S Ribosomal Protein S19 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 22473
95 % 2 33 1400
90 % 2 33 1424
70 % 2 33 1423
50 % 34 91 404
40 % 35 96 408
30 % 37 100 377
Entity #21 | Chains: U
40S Ribosomal Protein S20 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 26 1316
95 % 2 28 1640
90 % 2 28 1676
70 % 2 29 1656
50 % 36 99 355
40 % 36 105 350
30 % 332 527 32
Entity #22 | Chains: V
40S Ribosomal Protein S21 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 23873
95 % 2 33 1407
90 % 2 33 1430
70 % 2 34 1395
50 % 33 94 396
40 % 33 94 427
30 % 33 94 431
Entity #23 | Chains: W
40S Ribosomal Protein S15A protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 34 993
95 % 2 34 1356
90 % 2 34 1377
70 % 37 110 279
50 % 38 115 301
40 % 38 115 314
30 % 332 541 30
Entity #24 | Chains: X
40S Ribosomal Protein S23 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 32 1044
95 % 2 36 1273
90 % 2 37 1267
70 % 36 111 276
50 % 36 116 298
40 % 36 116 312
30 % 36 116 329
Entity #25 | Chains: Y
40S Ribosomal Protein S24 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 22806
95 % 2 33 1402
90 % 2 33 1426
70 % 2 34 1390
50 % 33 101 372
40 % 33 102 391
30 % 33 102 395
Entity #26 | Chains: Z
40S Ribosomal Protein S25 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 27 1281
95 % 2 27 1733
90 % 2 27 1768
70 % 2 28 1697
50 % 28 74 491
40 % 28 76 517
30 % 28 76 517
Entity #27 | Chains: a
40S Ribosomal Protein S26 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 28831
95 % 2 25 1886
90 % 2 25 1933
70 % 2 26 1845
50 % 3 50 1007
40 % 5 52 941
30 % 5 52 916
Entity #28 | Chains: b
40S Ribosomal Protein S27 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 33 1026
95 % 2 33 1406
90 % 2 33 1429
70 % 33 96 326
50 % 35 101 350
40 % 35 101 377
30 % 35 102 372
Entity #29 | Chains: c
40S Ribosomal Protein S28 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 30 1143
95 % 2 30 1553
90 % 2 33 1432
70 % 34 100 311
50 % 36 107 324
40 % 36 107 343
30 % 36 107 351
Entity #3 | Chains: C
40S Ribosomal Protein S2 protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26378
95 % 1 3 22117
90 % 2 25 1888
70 % 2 26 1816
50 % 28 78 469
40 % 28 78 501
30 % 28 78 501
Entity #30 | Chains: d
40S Ribosomal Protein S29 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 34 994
95 % 2 34 1360
90 % 2 34 1383
70 % 34 92 344
50 % 36 103 336
40 % 36 107 344
30 % 36 107 352
Entity #31 | Chains: e
40S Ribosomal Protein S30 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 5709
95 % 2 15 3142
90 % 2 15 3184
70 % 2 15 3155
50 % 2 16 2896
40 % 2 16 2857
30 % 2 16 2669
Entity #32 | Chains: f
40S Ribosomal Protein S27A protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 23 2044
95 % 2 24 1953
90 % 2 24 2003
70 % 3 44 1079
50 % 3 45 1099
40 % 3 46 1101
30 % 3 46 1078
Entity #33 | Chains: g
40S Ribosomal Protein RACK1 protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 35 897
95 % 3 35 1212
90 % 3 35 1241
70 % 4 37 1209
50 % 41 101 331
40 % 43 103 330
30 % 43 104 337
Entity #34 | Chains: i
18S Ribosomal RNA rna, length: 1863 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #35 | Chains: j
initiator Met-RNA-i rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #36 | Chains: k
mRNA rna, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #37 | Chains: n
human initiation factor eIF1A protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 28392
95 % 1 3 23575
90 % 1 3 22803
70 % 1 3 20784
50 % 1 8 8092
40 % 1 8 7422
30 % 1 8 6556
Entity #4 | Chains: D
40S Ribosomal Protein S3 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 15 3561
95 % 2 34 1344
90 % 2 34 1367
70 % 35 98 315
50 % 35 100 370
40 % 37 103 359
30 % 37 106 353
Entity #5 | Chains: E
40S Ribosomal Protein S4X protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 19755
95 % 2 26 1764
90 % 2 33 1405
70 % 33 93 340
50 % 35 104 334
40 % 35 104 358
30 % 35 108 349
Entity #6 | Chains: F
40S Ribosomal Protein S5 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 34 985
95 % 2 34 1348
90 % 2 34 1370
70 % 34 101 304
50 % 36 109 313
40 % 37 114 316
30 % 37 114 332
Entity #7 | Chains: G
40S Ribosomal Protein S6 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 32 1035
95 % 2 33 1383
90 % 2 33 1407
70 % 2 34 1384
50 % 33 98 380
40 % 33 99 402
30 % 33 99 410
Entity #8 | Chains: H
40S Ribosomal Protein S7 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 33 1010
95 % 2 33 1392
90 % 2 33 1416
70 % 2 34 1387
50 % 33 93 400
40 % 33 97 407
30 % 35 103 370
Entity #9 | Chains: I
40S Ribosomal Protein S8 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 21122
95 % 2 33 1390
90 % 2 33 1414
70 % 2 33 1417
50 % 35 103 339
40 % 35 103 364
30 % 35 103 369

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.