Sequence Similarity Clusters for the Entities in PDB 4KZZ

Entity #1 | Chains: A
40S Ribosomal Protein SA protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 22940
95 % 1 15 3751
90 % 1 15 3779
70 % 1 15 3724
50 % 20 50 674
40 % 22 52 634
30 % 22 52 629
Entity #10 | Chains: J
40S Ribosomal Protein S9 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 20 2079
95 % 1 20 2659
90 % 1 20 2701
70 % 22 63 434
50 % 22 64 472
40 % 22 66 492
30 % 22 66 499
Entity #11 | Chains: K
40S Ribosomal Protein S10 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 13 3661
95 % 1 15 3800
90 % 1 15 3831
70 % 1 15 3778
50 % 1 16 3465
40 % 1 17 3081
30 % 1 17 2880
Entity #12 | Chains: L
40S Ribosomal Protein S11 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 1900
95 % 1 21 2473
90 % 1 21 2517
70 % 20 55 527
50 % 22 63 480
40 % 22 63 523
30 % 22 63 527
Entity #13 | Chains: M
40S Ribosomal Protein S12 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 14 3437
95 % 1 20 2701
90 % 1 20 2738
70 % 1 20 2747
50 % 19 51 679
40 % 19 56 655
30 % 21 59 571
Entity #14 | Chains: N
40S Ribosomal Protein S13 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 20 2106
95 % 1 20 2687
90 % 1 20 2727
70 % 20 56 513
50 % 22 62 490
40 % 22 64 513
30 % 22 64 518
Entity #15 | Chains: O
40S Ribosomal Protein S14 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 1902
95 % 1 21 2478
90 % 1 22 2417
70 % 22 68 400
50 % 24 72 392
40 % 293 407 27
30 % 293 408 40
Entity #16 | Chains: P
40S Ribosomal Protein S15 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24858
95 % 1 16 3613
90 % 1 16 3641
70 % 1 18 3113
50 % 20 52 642
40 % 22 64 514
30 % 22 64 519
Entity #17 | Chains: Q
40S Ribosomal Protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 1906
95 % 1 21 2480
90 % 1 21 2522
70 % 1 23 2280
50 % 22 66 452
40 % 22 68 472
30 % 291 402 45
Entity #18 | Chains: R
40S Ribosomal Protein S17 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 20 2121
95 % 1 20 2698
90 % 1 20 2736
70 % 1 21 2537
50 % 22 63 481
40 % 22 63 524
30 % 22 63 529
Entity #19 | Chains: S
40S Ribosomal Protein S18 protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 1901
95 % 1 21 2476
90 % 1 21 2519
70 % 20 57 503
50 % 22 66 451
40 % 22 68 471
30 % 294 407 44
Entity #2 | Chains: B
40S Ribosomal Protein S3A protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 23263
95 % 1 15 3764
90 % 1 15 3793
70 % 1 15 3739
50 % 21 49 640
40 % 21 50 672
30 % 21 50 663
Entity #20 | Chains: T
40S Ribosomal Protein S19 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24859
95 % 1 20 2693
90 % 1 20 2732
70 % 1 20 2739
50 % 20 56 591
40 % 21 59 592
30 % 23 62 534
Entity #21 | Chains: U
40S Ribosomal Protein S20 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 14 3451
95 % 1 16 3631
90 % 1 16 3660
70 % 1 17 3289
50 % 22 62 492
40 % 22 66 494
30 % 297 406 41
Entity #22 | Chains: V
40S Ribosomal Protein S21 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25679
95 % 1 20 2724
90 % 1 20 2764
70 % 1 21 2547
50 % 19 56 609
40 % 19 56 657
30 % 19 56 648
Entity #23 | Chains: W
40S Ribosomal Protein S15A protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 1910
95 % 1 21 2487
90 % 1 21 2530
70 % 22 66 411
50 % 23 69 426
40 % 23 69 459
30 % 297 411 39
Entity #24 | Chains: X
40S Ribosomal Protein S23 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 19 2226
95 % 1 23 2234
90 % 1 24 2189
70 % 22 70 387
50 % 22 72 413
40 % 22 72 445
30 % 22 72 458
Entity #25 | Chains: Y
40S Ribosomal Protein S24 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25011
95 % 1 20 2700
90 % 1 20 2737
70 % 1 21 2538
50 % 19 60 561
40 % 19 60 593
30 % 19 60 604
Entity #26 | Chains: Z
40S Ribosomal Protein S25 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 15 3088
95 % 1 15 3817
90 % 1 15 3849
70 % 1 16 3610
50 % 20 49 697
40 % 20 51 705
30 % 20 51 706
Entity #27 | Chains: a
40S Ribosomal Protein S26 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25265
95 % 1 14 4164
90 % 1 14 4183
70 % 1 15 3801
50 % 2 30 1623
40 % 4 32 1360
30 % 4 32 1339
Entity #28 | Chains: b
40S Ribosomal Protein S27 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 20 2150
95 % 1 20 2723
90 % 1 20 2763
70 % 19 57 516
50 % 21 61 512
40 % 21 61 547
30 % 21 61 555
Entity #29 | Chains: c
40S Ribosomal Protein S28 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 17 2591
95 % 1 17 3283
90 % 1 20 2769
70 % 20 59 491
50 % 22 64 476
40 % 22 64 517
30 % 22 64 520
Entity #3 | Chains: C
40S Ribosomal Protein S2 protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 23105
95 % 1 3 19451
90 % 1 13 4336
70 % 1 14 3980
50 % 20 49 688
40 % 20 49 723
30 % 20 49 726
Entity #30 | Chains: d
40S Ribosomal Protein S29 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 1930
95 % 1 21 2508
90 % 1 21 2548
70 % 20 57 506
50 % 22 65 465
40 % 22 65 505
30 % 22 65 510
Entity #31 | Chains: e
40S Ribosomal Protein S30 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25012
95 % 1 5 12725
90 % 1 5 12488
70 % 1 5 11754
50 % 1 6 9359
40 % 1 6 8521
30 % 1 6 7476
Entity #32 | Chains: f
40S Ribosomal Protein S27A protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 13 3667
95 % 1 13 4381
90 % 1 13 4408
70 % 2 26 1876
50 % 2 26 1897
40 % 2 27 1847
30 % 2 27 1763
Entity #33 | Chains: g
40S Ribosomal Protein RACK1 protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 22 1534
95 % 2 22 2053
90 % 2 22 2094
70 % 3 24 1926
50 % 25 63 437
40 % 27 65 436
30 % 27 65 443
Entity #34 | Chains: i
18S Ribosomal RNA rna, length: 1863 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #35 | Chains: j
initiator Met-RNA-i rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #36 | Chains: k
mRNA rna, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #37 | Chains: n
human initiation factor eIF1A protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24873
95 % 1 3 20717
90 % 1 3 20069
70 % 1 3 18395
50 % 1 8 7118
40 % 1 8 6564
30 % 1 8 5825
Entity #4 | Chains: D
40S Ribosomal Protein S3 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 10779
95 % 1 21 2452
90 % 1 21 2497
70 % 21 62 458
50 % 21 63 519
40 % 23 65 502
30 % 23 66 497
Entity #5 | Chains: E
40S Ribosomal Protein S4X protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 23277
95 % 1 13 4327
90 % 1 20 2671
70 % 19 54 553
50 % 21 61 507
40 % 21 61 542
30 % 21 63 532
Entity #6 | Chains: F
40S Ribosomal Protein S5 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 1890
95 % 1 21 2463
90 % 1 21 2509
70 % 20 61 469
50 % 22 67 445
40 % 23 70 457
30 % 23 70 469
Entity #7 | Chains: G
40S Ribosomal Protein S6 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 19 2203
95 % 1 20 2634
90 % 1 20 2676
70 % 1 21 2510
50 % 19 58 577
40 % 19 58 623
30 % 19 58 621
Entity #8 | Chains: H
40S Ribosomal Protein S7 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 20 2078
95 % 1 20 2658
90 % 1 20 2700
70 % 1 21 2524
50 % 19 53 641
40 % 19 57 637
30 % 21 60 559
Entity #9 | Chains: I
40S Ribosomal Protein S8 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24076
95 % 1 20 2655
90 % 1 20 2697
70 % 1 20 2708
50 % 21 60 520
40 % 21 60 552
30 % 21 60 558

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.