Sequence Similarity Clusters for the Entities in PDB 4KZZ

Entity #1 | Chains: A
40S Ribosomal Protein SA protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24293
95 % 1 23 2408
90 % 1 23 2453
70 % 1 23 2440
50 % 24 67 516
40 % 26 69 518
30 % 26 69 516
Entity #10 | Chains: J
40S Ribosomal Protein S9 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1300
95 % 1 29 1784
90 % 1 29 1825
70 % 29 87 334
50 % 29 88 366
40 % 29 91 385
30 % 29 91 386
Entity #11 | Chains: K
40S Ribosomal Protein S10 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2080
95 % 1 23 2431
90 % 1 23 2477
70 % 1 23 2463
50 % 1 24 2320
40 % 1 25 2160
30 % 1 25 2063
Entity #12 | Chains: L
40S Ribosomal Protein S11 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1249
95 % 1 30 1719
90 % 1 30 1757
70 % 27 78 386
50 % 29 87 377
40 % 29 87 409
30 % 29 87 407
Entity #13 | Chains: M
40S Ribosomal Protein S12 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 23 1869
95 % 1 29 1792
90 % 1 29 1833
70 % 1 29 1848
50 % 27 75 464
40 % 27 80 484
30 % 29 83 443
Entity #14 | Chains: N
40S Ribosomal Protein S13 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1304
95 % 1 29 1786
90 % 1 29 1827
70 % 27 80 375
50 % 29 86 383
40 % 29 89 397
30 % 29 89 394
Entity #15 | Chains: O
40S Ribosomal Protein S14 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 22 1975
95 % 1 22 2586
90 % 1 23 2481
70 % 29 84 341
50 % 31 89 343
40 % 318 469 19
30 % 318 470 33
Entity #16 | Chains: P
40S Ribosomal Protein S15 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 5225
95 % 1 24 2333
90 % 1 24 2381
70 % 1 26 2112
50 % 28 83 426
40 % 30 89 404
30 % 30 89 403
Entity #17 | Chains: Q
40S Ribosomal Protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1253
95 % 1 30 1725
90 % 1 30 1764
70 % 1 32 1650
50 % 29 90 359
40 % 29 93 379
30 % 316 472 37
Entity #18 | Chains: R
40S Ribosomal Protein S17 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1305
95 % 1 29 1790
90 % 1 29 1831
70 % 1 30 1786
50 % 29 86 384
40 % 29 86 423
30 % 29 86 415
Entity #19 | Chains: S
40S Ribosomal Protein S18 protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1251
95 % 1 30 1722
90 % 1 30 1760
70 % 27 80 374
50 % 29 89 363
40 % 29 92 383
30 % 319 476 35
Entity #2 | Chains: B
40S Ribosomal Protein S3A protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24628
95 % 1 23 2416
90 % 1 23 2461
70 % 1 23 2448
50 % 25 67 501
40 % 25 68 529
30 % 25 68 530
Entity #20 | Chains: T
40S Ribosomal Protein S19 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 20814
95 % 1 29 1787
90 % 1 29 1828
70 % 1 29 1846
50 % 27 79 441
40 % 28 83 452
30 % 30 86 414
Entity #21 | Chains: U
40S Ribosomal Protein S20 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 22 1987
95 % 1 24 2355
90 % 1 24 2403
70 % 1 25 2191
50 % 29 85 393
40 % 29 90 391
30 % 322 475 29
Entity #22 | Chains: V
40S Ribosomal Protein S21 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 22122
95 % 1 29 1799
90 % 1 29 1839
70 % 1 30 1800
50 % 26 79 445
40 % 26 79 485
30 % 26 79 486
Entity #23 | Chains: W
40S Ribosomal Protein S15A protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1256
95 % 1 30 1729
90 % 1 30 1768
70 % 30 91 321
50 % 31 95 344
40 % 31 95 374
30 % 323 482 28
Entity #24 | Chains: X
40S Ribosomal Protein S23 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 1402
95 % 1 32 1588
90 % 1 33 1537
70 % 29 93 315
50 % 29 96 339
40 % 29 96 366
30 % 29 96 373
Entity #25 | Chains: Y
40S Ribosomal Protein S24 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 21125
95 % 1 29 1791
90 % 1 29 1832
70 % 1 30 1788
50 % 26 83 427
40 % 26 83 460
30 % 26 83 463
Entity #26 | Chains: Z
40S Ribosomal Protein S25 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 23 1871
95 % 1 23 2442
90 % 1 23 2490
70 % 1 24 2385
50 % 24 66 524
40 % 24 68 548
30 % 24 68 551
Entity #27 | Chains: a
40S Ribosomal Protein S26 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26740
95 % 1 22 2601
90 % 1 22 2643
70 % 1 23 2476
50 % 2 43 1195
40 % 4 45 1065
30 % 4 45 1050
Entity #28 | Chains: b
40S Ribosomal Protein S27 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1312
95 % 1 29 1798
90 % 1 29 1838
70 % 26 80 384
50 % 28 84 402
40 % 28 84 442
30 % 28 84 434
Entity #29 | Chains: c
40S Ribosomal Protein S28 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 26 1561
95 % 1 26 2079
90 % 1 29 1842
70 % 27 83 356
50 % 29 89 365
40 % 29 89 399
30 % 29 89 397
Entity #3 | Chains: C
40S Ribosomal Protein S2 protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24463
95 % 1 3 20510
90 % 1 21 2709
70 % 1 22 2561
50 % 24 66 522
40 % 24 66 563
30 % 24 66 567
Entity #30 | Chains: d
40S Ribosomal Protein S29 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1276
95 % 1 30 1745
90 % 1 30 1784
70 % 27 80 376
50 % 29 88 372
40 % 29 88 407
30 % 29 88 405
Entity #31 | Chains: e
40S Ribosomal Protein S30 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 5239
95 % 1 13 4688
90 % 1 13 4711
70 % 1 13 4652
50 % 1 14 4201
40 % 1 14 4013
30 % 1 14 3694
Entity #32 | Chains: f
40S Ribosomal Protein S27A protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2082
95 % 1 21 2693
90 % 1 21 2738
70 % 2 39 1275
50 % 2 39 1320
40 % 2 40 1288
30 % 2 40 1269
Entity #33 | Chains: g
40S Ribosomal Protein RACK1 protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 31 1060
95 % 2 31 1492
90 % 2 31 1524
70 % 3 33 1455
50 % 33 87 351
40 % 35 89 361
30 % 35 89 368
Entity #34 | Chains: i
18S Ribosomal RNA rna, length: 1863 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #35 | Chains: j
initiator Met-RNA-i rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #36 | Chains: k
mRNA rna, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #37 | Chains: n
human initiation factor eIF1A protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26327
95 % 1 3 21844
90 % 1 3 21152
70 % 1 3 19391
50 % 1 8 7523
40 % 1 8 6930
30 % 1 8 6128
Entity #4 | Chains: D
40S Ribosomal Protein S3 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 15 3280
95 % 1 30 1703
90 % 1 30 1740
70 % 28 85 350
50 % 28 86 404
40 % 30 88 401
30 % 30 90 390
Entity #5 | Chains: E
40S Ribosomal Protein S4X protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 18258
95 % 1 22 2539
90 % 1 29 1811
70 % 26 77 388
50 % 28 85 397
40 % 28 85 434
30 % 28 88 406
Entity #6 | Chains: F
40S Ribosomal Protein S5 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 30 1242
95 % 1 30 1710
90 % 1 30 1747
70 % 27 85 351
50 % 29 91 353
40 % 30 95 371
30 % 30 95 376
Entity #7 | Chains: G
40S Ribosomal Protein S6 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 1368
95 % 1 29 1773
90 % 1 29 1814
70 % 1 30 1758
50 % 26 81 436
40 % 26 81 471
30 % 26 81 473
Entity #8 | Chains: H
40S Ribosomal Protein S7 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 29 1299
95 % 1 29 1783
90 % 1 29 1824
70 % 1 30 1772
50 % 26 76 453
40 % 26 80 478
30 % 28 84 433
Entity #9 | Chains: I
40S Ribosomal Protein S8 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 19543
95 % 1 29 1779
90 % 1 29 1820
70 % 1 29 1839
50 % 28 84 401
40 % 28 84 441
30 % 28 84 432

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.