Sequence Similarity Clusters for the Entities in PDB 4KZY

Entity #1 | Chains: A
40S Ribosomal Protein SA protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 23903
95 % 3 15 3902
90 % 3 15 3934
70 % 3 15 3867
50 % 26 54 608
40 % 28 56 584
30 % 28 56 592
Entity #10 | Chains: J
40S Ribosomal Protein S9 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2001
95 % 3 21 2587
90 % 3 21 2634
70 % 29 72 378
50 % 29 73 413
40 % 29 75 442
30 % 29 75 446
Entity #11 | Chains: K
40S Ribosomal Protein S10 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 13 3852
95 % 3 15 3957
90 % 3 15 3990
70 % 3 15 3931
50 % 3 16 3609
40 % 3 17 3205
30 % 3 17 2993
Entity #12 | Chains: L
40S Ribosomal Protein S11 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 22 1899
95 % 3 22 2488
90 % 3 22 2531
70 % 27 63 451
50 % 29 72 422
40 % 29 72 462
30 % 29 72 465
Entity #13 | Chains: M
40S Ribosomal Protein S12 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 15 3254
95 % 3 21 2607
90 % 3 21 2652
70 % 3 21 2649
50 % 26 59 565
40 % 26 64 560
30 % 28 67 513
Entity #14 | Chains: N
40S Ribosomal Protein S13 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2009
95 % 3 21 2597
90 % 3 21 2641
70 % 27 65 436
50 % 29 71 425
40 % 29 73 454
30 % 29 73 455
Entity #15 | Chains: O
40S Ribosomal Protein S14 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 22 1903
95 % 3 22 2491
90 % 3 23 2388
70 % 29 77 359
50 % 31 81 362
40 % 314 442 20
30 % 314 443 33
Entity #16 | Chains: P
40S Ribosomal Protein S15 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 25898
95 % 3 16 3755
90 % 3 16 3786
70 % 3 18 3240
50 % 27 66 498
40 % 29 72 463
30 % 29 72 466
Entity #17 | Chains: Q
40S Ribosomal Protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 22 1905
95 % 3 22 2492
90 % 3 22 2534
70 % 3 24 2296
50 % 29 75 405
40 % 29 77 433
30 % 312 437 40
Entity #18 | Chains: R
40S Ribosomal Protein S17 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2013
95 % 3 21 2603
90 % 3 21 2648
70 % 3 22 2525
50 % 29 71 426
40 % 29 71 467
30 % 29 71 473
Entity #19 | Chains: S
40S Ribosomal Protein S18 protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 22 1902
95 % 3 22 2490
90 % 3 22 2533
70 % 27 65 435
50 % 29 74 410
40 % 29 76 438
30 % 315 441 39
Entity #2 | Chains: B
40S Ribosomal Protein S3A protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 24242
95 % 3 15 3916
90 % 3 15 3949
70 % 3 15 3884
50 % 27 54 583
40 % 27 55 604
30 % 27 55 613
Entity #20 | Chains: T
40S Ribosomal Protein S19 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 20469
95 % 3 21 2599
90 % 3 21 2643
70 % 3 21 2644
50 % 27 64 509
40 % 28 67 523
30 % 30 70 479
Entity #21 | Chains: U
40S Ribosomal Protein S20 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 14 3623
95 % 3 16 3774
90 % 3 16 3806
70 % 3 17 3415
50 % 29 70 435
40 % 29 74 449
30 % 318 440 36
Entity #22 | Chains: V
40S Ribosomal Protein S21 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 21758
95 % 3 21 2625
90 % 3 21 2668
70 % 3 22 2552
50 % 26 64 519
40 % 26 64 562
30 % 26 64 565
Entity #23 | Chains: W
40S Ribosomal Protein S15A protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 22 1912
95 % 3 22 2498
90 % 3 22 2540
70 % 30 76 367
50 % 31 79 393
40 % 31 79 423
30 % 319 447 31
Entity #24 | Chains: X
40S Ribosomal Protein S23 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 20 2235
95 % 3 24 2246
90 % 3 25 2096
70 % 29 78 356
50 % 29 80 386
40 % 29 80 415
30 % 29 80 423
Entity #25 | Chains: Y
40S Ribosomal Protein S24 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 20774
95 % 3 21 2606
90 % 3 21 2651
70 % 3 22 2526
50 % 26 68 489
40 % 26 68 525
30 % 26 68 530
Entity #26 | Chains: Z
40S Ribosomal Protein S25 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 15 3258
95 % 3 15 3978
90 % 3 15 4011
70 % 3 16 3743
50 % 26 53 621
40 % 26 55 635
30 % 26 55 652
Entity #27 | Chains: a
40S Ribosomal Protein S26 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26318
95 % 3 14 4344
90 % 3 14 4363
70 % 3 15 3961
50 % 4 30 1697
40 % 6 32 1418
30 % 6 32 1396
Entity #28 | Chains: b
40S Ribosomal Protein S27 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2029
95 % 3 21 2624
90 % 3 21 2667
70 % 26 65 445
50 % 28 69 461
40 % 28 69 496
30 % 28 69 502
Entity #29 | Chains: c
40S Ribosomal Protein S28 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 18 2594
95 % 3 18 3270
90 % 3 21 2673
70 % 27 68 417
50 % 29 73 414
40 % 29 73 456
30 % 29 73 457
Entity #3 | Chains: C
40S Ribosomal Protein S2 protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 24077
95 % 3 3 20205
90 % 3 13 4517
70 % 3 14 4143
50 % 26 53 617
40 % 26 53 656
30 % 26 53 663
Entity #30 | Chains: d
40S Ribosomal Protein S29 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 22 1935
95 % 3 22 2520
90 % 3 22 2562
70 % 27 65 437
50 % 29 73 415
40 % 29 73 457
30 % 29 73 458
Entity #31 | Chains: e
40S Ribosomal Protein S30 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26059
95 % 3 5 13284
90 % 3 5 13046
70 % 3 5 12273
50 % 3 6 9755
40 % 3 6 8867
30 % 3 6 7756
Entity #32 | Chains: f
40S Ribosomal Protein S27A protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 13 3857
95 % 3 13 4577
90 % 3 13 4599
70 % 4 26 1967
50 % 4 26 1982
40 % 4 27 1920
30 % 4 27 1844
Entity #33 | Chains: g
40S Ribosomal Protein RACK1 protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 23 1510
95 % 4 23 2010
90 % 4 23 2066
70 % 5 25 1942
50 % 32 71 400
40 % 34 73 407
30 % 34 73 410
Entity #34 | Chains: i
18S Ribosomal RNA rna, length: 1863 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #35 | Chains: l
human initiation factor eIF1 protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 41867
95 % 2 2 31352
90 % 2 2 30031
70 % 2 2 26889
50 % 2 8 7554
40 % 2 8 6953
30 % 2 8 6154
Entity #36 | Chains: n
human initiation factor eIF1A protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 25913
95 % 2 3 21510
90 % 2 3 20820
70 % 2 3 19093
50 % 2 8 7415
40 % 2 8 6830
30 % 2 8 6047
Entity #4 | Chains: D
40S Ribosomal Protein S3 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9284
95 % 3 22 2453
90 % 3 22 2498
70 % 28 70 401
50 % 28 71 467
40 % 30 73 452
30 % 30 74 449
Entity #5 | Chains: E
40S Ribosomal Protein S4X protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 17957
95 % 3 14 4205
90 % 3 21 2614
70 % 26 62 464
50 % 28 70 442
40 % 28 70 479
30 % 28 72 470
Entity #6 | Chains: F
40S Ribosomal Protein S5 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 22 1888
95 % 3 22 2469
90 % 3 22 2512
70 % 27 70 404
50 % 29 76 401
40 % 30 79 421
30 % 30 79 428
Entity #7 | Chains: G
40S Ribosomal Protein S6 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 20 2167
95 % 3 21 2572
90 % 3 21 2618
70 % 3 22 2495
50 % 26 66 502
40 % 26 66 541
30 % 26 66 547
Entity #8 | Chains: H
40S Ribosomal Protein S7 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2000
95 % 3 21 2586
90 % 3 21 2633
70 % 3 22 2513
50 % 26 61 537
40 % 26 65 551
30 % 28 69 495
Entity #9 | Chains: I
40S Ribosomal Protein S8 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 19215
95 % 3 21 2581
90 % 3 21 2628
70 % 3 21 2630
50 % 28 69 457
40 % 28 69 491
30 % 28 69 493

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.