Sequence Similarity Clusters for the Entities in PDB 4KZY

Entity #1 | Chains: A
40S Ribosomal Protein SA protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 25362
95 % 3 25 2203
90 % 3 25 2271
70 % 3 25 2270
50 % 29 75 484
40 % 31 77 500
30 % 31 77 499
Entity #10 | Chains: J
40S Ribosomal Protein S9 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 31 1259
95 % 3 31 1702
90 % 3 31 1737
70 % 35 99 307
50 % 35 101 339
40 % 35 105 348
30 % 35 105 354
Entity #11 | Chains: K
40S Ribosomal Protein S10 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 23 1968
95 % 3 25 2228
90 % 3 25 2296
70 % 3 25 2290
50 % 3 26 2199
40 % 3 27 2111
30 % 3 27 2017
Entity #12 | Chains: L
40S Ribosomal Protein S11 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 32 1212
95 % 3 32 1656
90 % 3 32 1688
70 % 33 90 349
50 % 35 100 344
40 % 35 100 373
30 % 35 100 382
Entity #13 | Chains: M
40S Ribosomal Protein S12 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 23 1975
95 % 3 31 1716
90 % 3 31 1752
70 % 3 31 1784
50 % 33 84 440
40 % 33 89 461
30 % 35 92 429
Entity #14 | Chains: N
40S Ribosomal Protein S13 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 31 1262
95 % 3 31 1707
90 % 3 31 1743
70 % 33 92 343
50 % 35 98 361
40 % 35 102 364
30 % 35 102 372
Entity #15 | Chains: O
40S Ribosomal Protein S14 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 24 1879
95 % 3 24 2451
90 % 3 25 2299
70 % 35 96 319
50 % 37 102 319
40 % 324 501 19
30 % 324 501 33
Entity #16 | Chains: P
40S Ribosomal Protein S15 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 5491
95 % 3 26 2158
90 % 3 26 2223
70 % 3 28 2051
50 % 34 93 406
40 % 36 99 390
30 % 36 99 392
Entity #17 | Chains: Q
40S Ribosomal Protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 32 1219
95 % 3 32 1662
90 % 3 32 1693
70 % 3 34 1599
50 % 35 102 338
40 % 35 106 346
30 % 322 501 35
Entity #18 | Chains: R
40S Ribosomal Protein S17 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 31 1265
95 % 3 31 1713
90 % 3 31 1749
70 % 3 32 1731
50 % 36 96 375
40 % 36 96 406
30 % 36 96 410
Entity #19 | Chains: S
40S Ribosomal Protein S18 protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 32 1218
95 % 3 32 1661
90 % 3 32 1692
70 % 33 88 363
50 % 35 98 360
40 % 35 102 365
30 % 325 502 36
Entity #2 | Chains: B
40S Ribosomal Protein S3A protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 25720
95 % 3 25 2209
90 % 3 25 2276
70 % 3 25 2277
50 % 30 76 471
40 % 30 78 501
30 % 30 78 501
Entity #20 | Chains: T
40S Ribosomal Protein S19 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 21749
95 % 3 31 1708
90 % 3 31 1744
70 % 3 31 1781
50 % 33 87 425
40 % 34 92 437
30 % 36 95 409
Entity #21 | Chains: U
40S Ribosomal Protein S20 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 24 1900
95 % 3 26 2168
90 % 3 26 2235
70 % 3 27 2147
50 % 35 95 376
40 % 35 100 378
30 % 329 502 32
Entity #22 | Chains: V
40S Ribosomal Protein S21 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 23100
95 % 3 31 1726
90 % 3 31 1763
70 % 3 32 1743
50 % 32 88 427
40 % 32 88 462
30 % 32 88 456
Entity #23 | Chains: W
40S Ribosomal Protein S15A protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 32 1224
95 % 3 32 1665
90 % 3 32 1696
70 % 36 104 297
50 % 37 109 316
40 % 37 109 340
30 % 329 514 30
Entity #24 | Chains: X
40S Ribosomal Protein S23 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 30 1342
95 % 3 34 1534
90 % 3 35 1506
70 % 35 106 290
50 % 35 110 314
40 % 35 110 335
30 % 35 110 344
Entity #25 | Chains: Y
40S Ribosomal Protein S24 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 22071
95 % 3 31 1715
90 % 3 31 1751
70 % 3 32 1732
50 % 32 96 396
40 % 32 96 423
30 % 32 96 425
Entity #26 | Chains: Z
40S Ribosomal Protein S25 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 25 1689
95 % 3 25 2239
90 % 3 25 2306
70 % 3 26 2233
50 % 29 72 501
40 % 29 74 533
30 % 29 74 534
Entity #27 | Chains: a
40S Ribosomal Protein S26 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 27943
95 % 3 24 2479
90 % 3 24 2530
70 % 3 25 2301
50 % 4 48 1108
40 % 6 50 1015
30 % 6 50 990
Entity #28 | Chains: b
40S Ribosomal Protein S27 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 31 1271
95 % 3 31 1724
90 % 3 31 1761
70 % 32 91 353
50 % 34 96 378
40 % 34 96 407
30 % 34 96 412
Entity #29 | Chains: c
40S Ribosomal Protein S28 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 28 1517
95 % 3 28 2028
90 % 3 31 1764
70 % 33 94 335
50 % 35 101 340
40 % 35 101 369
30 % 35 101 377
Entity #3 | Chains: C
40S Ribosomal Protein S2 protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 25540
95 % 3 3 21399
90 % 3 23 2584
70 % 3 24 2410
50 % 29 74 489
40 % 29 74 530
30 % 29 74 530
Entity #30 | Chains: d
40S Ribosomal Protein S29 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 32 1238
95 % 3 32 1676
90 % 3 32 1708
70 % 33 88 364
50 % 35 97 368
40 % 35 97 399
30 % 35 97 399
Entity #31 | Chains: e
40S Ribosomal Protein S30 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 5506
95 % 3 14 4615
90 % 3 14 4627
70 % 3 14 4523
50 % 3 15 4067
40 % 3 15 3897
30 % 3 15 3591
Entity #32 | Chains: f
40S Ribosomal Protein S27A protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 23 1970
95 % 3 23 2566
90 % 3 23 2617
70 % 4 43 1193
50 % 4 43 1243
40 % 4 44 1230
30 % 4 44 1206
Entity #33 | Chains: g
40S Ribosomal Protein RACK1 protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 33 1072
95 % 4 33 1463
90 % 4 33 1490
70 % 5 35 1403
50 % 40 97 343
40 % 42 99 345
30 % 42 99 352
Entity #34 | Chains: i
18S Ribosomal RNA rna, length: 1863 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #35 | Chains: l
human initiation factor eIF1 protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 44373
95 % 2 2 33230
90 % 2 2 31803
70 % 2 2 28390
50 % 2 9 6769
40 % 2 9 6290
30 % 2 9 5609
Entity #36 | Chains: n
human initiation factor eIF1A protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 27507
95 % 2 3 22824
90 % 2 3 22095
70 % 2 3 20237
50 % 2 8 7841
40 % 2 8 7191
30 % 2 8 6340
Entity #4 | Chains: D
40S Ribosomal Protein S3 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 15 3437
95 % 3 32 1636
90 % 3 32 1668
70 % 34 93 337
50 % 34 95 393
40 % 36 97 394
30 % 36 100 381
Entity #5 | Chains: E
40S Ribosomal Protein S4X protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 19108
95 % 3 24 2377
90 % 3 31 1728
70 % 32 89 360
50 % 34 98 366
40 % 34 98 393
30 % 34 102 376
Entity #6 | Chains: F
40S Ribosomal Protein S5 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 32 1205
95 % 3 32 1648
90 % 3 32 1681
70 % 33 96 329
50 % 35 103 332
40 % 36 108 342
30 % 36 108 348
Entity #7 | Chains: G
40S Ribosomal Protein S6 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 30 1323
95 % 3 31 1696
90 % 3 31 1729
70 % 3 32 1702
50 % 32 93 405
40 % 32 93 434
30 % 32 93 437
Entity #8 | Chains: H
40S Ribosomal Protein S7 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 31 1258
95 % 3 31 1701
90 % 3 31 1736
70 % 3 32 1716
50 % 32 88 422
40 % 32 92 441
30 % 34 97 404
Entity #9 | Chains: I
40S Ribosomal Protein S8 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 20448
95 % 3 31 1700
90 % 3 31 1735
70 % 3 31 1772
50 % 34 97 372
40 % 34 97 404
30 % 34 97 403

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.