Sequence Similarity Clusters for the Entities in PDB 4KZY

Entity #1 | Chains: A
40S Ribosomal Protein SA protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26248
95 % 4 27 1691
90 % 4 27 1729
70 % 4 27 1753
50 % 30 79 464
40 % 32 81 477
30 % 32 81 475
Entity #10 | Chains: J
40S Ribosomal Protein S9 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 33 1012
95 % 4 33 1397
90 % 4 33 1419
70 % 38 104 292
50 % 38 107 323
40 % 38 111 329
30 % 38 111 339
Entity #11 | Chains: K
40S Ribosomal Protein S10 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 25 1393
95 % 4 27 1725
90 % 4 27 1760
70 % 4 27 1785
50 % 4 28 1737
40 % 4 29 1691
30 % 4 29 1656
Entity #12 | Chains: L
40S Ribosomal Protein S11 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 34 988
95 % 4 34 1354
90 % 4 34 1374
70 % 36 94 332
50 % 38 106 329
40 % 38 106 350
30 % 38 106 357
Entity #13 | Chains: M
40S Ribosomal Protein S12 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 25 1399
95 % 4 33 1407
90 % 4 33 1429
70 % 4 33 1427
50 % 36 88 424
40 % 36 94 432
30 % 38 97 409
Entity #14 | Chains: N
40S Ribosomal Protein S13 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 33 1021
95 % 4 33 1403
90 % 4 33 1425
70 % 36 101 306
50 % 38 104 335
40 % 38 108 339
30 % 38 108 346
Entity #15 | Chains: O
40S Ribosomal Protein S14 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 26 1312
95 % 4 26 1775
90 % 4 27 1766
70 % 38 101 300
50 % 40 116 288
40 % 329 537 19
30 % 329 537 31
Entity #16 | Chains: P
40S Ribosomal Protein S15 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 5701
95 % 4 28 1637
90 % 4 28 1673
70 % 4 32 1462
50 % 37 98 383
40 % 39 105 356
30 % 39 105 362
Entity #17 | Chains: Q
40S Ribosomal Protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 34 991
95 % 4 34 1357
90 % 4 34 1377
70 % 4 37 1297
50 % 38 108 320
40 % 38 112 326
30 % 327 526 34
Entity #18 | Chains: R
40S Ribosomal Protein S17 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 33 1022
95 % 4 33 1405
90 % 4 33 1427
70 % 4 34 1393
50 % 41 104 346
40 % 41 104 371
30 % 41 104 372
Entity #19 | Chains: S
40S Ribosomal Protein S18 protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 34 990
95 % 4 34 1356
90 % 4 34 1376
70 % 36 92 343
50 % 38 103 337
40 % 38 108 340
30 % 330 527 36
Entity #2 | Chains: B
40S Ribosomal Protein S3A protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26613
95 % 4 27 1702
90 % 4 27 1739
70 % 4 27 1762
50 % 31 79 449
40 % 31 81 481
30 % 31 82 476
Entity #20 | Chains: T
40S Ribosomal Protein S19 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 22511
95 % 4 33 1404
90 % 4 33 1426
70 % 4 33 1426
50 % 36 91 405
40 % 37 96 409
30 % 39 100 378
Entity #21 | Chains: U
40S Ribosomal Protein S20 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 26 1316
95 % 4 28 1642
90 % 4 28 1678
70 % 4 29 1657
50 % 38 99 356
40 % 38 105 352
30 % 334 528 32
Entity #22 | Chains: V
40S Ribosomal Protein S21 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 23915
95 % 4 33 1411
90 % 4 33 1432
70 % 4 34 1399
50 % 35 94 397
40 % 35 94 428
30 % 35 94 433
Entity #23 | Chains: W
40S Ribosomal Protein S15A protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 34 994
95 % 4 34 1359
90 % 4 34 1379
70 % 39 110 281
50 % 40 115 302
40 % 40 115 316
30 % 334 542 30
Entity #24 | Chains: X
40S Ribosomal Protein S23 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 32 1045
95 % 4 36 1276
90 % 4 37 1269
70 % 38 111 278
50 % 38 116 299
40 % 38 116 314
30 % 38 116 329
Entity #25 | Chains: Y
40S Ribosomal Protein S24 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 22846
95 % 4 33 1406
90 % 4 33 1428
70 % 4 34 1394
50 % 35 101 373
40 % 35 102 392
30 % 35 102 396
Entity #26 | Chains: Z
40S Ribosomal Protein S25 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 27 1281
95 % 4 27 1735
90 % 4 27 1770
70 % 4 28 1699
50 % 30 74 493
40 % 30 76 519
30 % 30 76 519
Entity #27 | Chains: a
40S Ribosomal Protein S26 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 28886
95 % 4 25 1890
90 % 4 25 1936
70 % 4 26 1848
50 % 5 50 1008
40 % 7 52 942
30 % 7 52 917
Entity #28 | Chains: b
40S Ribosomal Protein S27 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 33 1027
95 % 4 33 1410
90 % 4 33 1431
70 % 35 96 327
50 % 37 101 352
40 % 37 101 379
30 % 37 102 373
Entity #29 | Chains: c
40S Ribosomal Protein S28 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 30 1143
95 % 4 30 1554
90 % 4 33 1434
70 % 36 100 312
50 % 38 107 326
40 % 38 107 345
30 % 38 107 352
Entity #3 | Chains: C
40S Ribosomal Protein S2 protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26431
95 % 3 3 22162
90 % 4 25 1890
70 % 4 26 1819
50 % 30 78 471
40 % 30 78 503
30 % 30 78 503
Entity #30 | Chains: d
40S Ribosomal Protein S29 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 34 995
95 % 4 34 1363
90 % 4 34 1385
70 % 36 92 345
50 % 38 103 338
40 % 38 107 346
30 % 38 107 353
Entity #31 | Chains: e
40S Ribosomal Protein S30 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 5717
95 % 4 15 3146
90 % 4 15 3187
70 % 4 15 3158
50 % 4 16 2900
40 % 4 16 2862
30 % 4 16 2676
Entity #32 | Chains: f
40S Ribosomal Protein S27A protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 23 2047
95 % 4 24 1956
90 % 4 24 2004
70 % 5 44 1081
50 % 5 45 1102
40 % 5 46 1103
30 % 5 46 1080
Entity #33 | Chains: g
40S Ribosomal Protein RACK1 protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 35 899
95 % 5 35 1215
90 % 5 35 1244
70 % 6 37 1212
50 % 43 101 333
40 % 45 103 332
30 % 45 104 338
Entity #34 | Chains: i
18S Ribosomal RNA rna, length: 1863 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #35 | Chains: l
human initiation factor eIF1 protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 45736
95 % 2 2 34258
90 % 2 2 32752
70 % 2 2 29180
50 % 2 9 7001
40 % 2 9 6504
30 % 2 9 5804
Entity #36 | Chains: n
human initiation factor eIF1A protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 28447
95 % 2 3 23621
90 % 2 3 22852
70 % 2 3 20838
50 % 2 8 8105
40 % 2 8 7433
30 % 2 8 6561
Entity #4 | Chains: D
40S Ribosomal Protein S3 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 15 3567
95 % 4 34 1347
90 % 4 34 1369
70 % 37 98 316
50 % 37 100 371
40 % 39 103 361
30 % 39 106 354
Entity #5 | Chains: E
40S Ribosomal Protein S4X protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 19788
95 % 4 26 1766
90 % 4 33 1407
70 % 35 93 341
50 % 37 104 336
40 % 37 104 360
30 % 37 108 350
Entity #6 | Chains: F
40S Ribosomal Protein S5 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 34 986
95 % 4 34 1351
90 % 4 34 1372
70 % 36 101 305
50 % 38 109 315
40 % 39 114 318
30 % 39 114 332
Entity #7 | Chains: G
40S Ribosomal Protein S6 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 32 1036
95 % 4 33 1387
90 % 4 33 1409
70 % 4 34 1388
50 % 35 98 381
40 % 35 99 404
30 % 35 99 412
Entity #8 | Chains: H
40S Ribosomal Protein S7 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 33 1011
95 % 4 33 1396
90 % 4 33 1418
70 % 4 34 1391
50 % 35 93 401
40 % 35 97 408
30 % 37 103 371
Entity #9 | Chains: I
40S Ribosomal Protein S8 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 21161
95 % 4 33 1394
90 % 4 33 1416
70 % 4 33 1420
50 % 37 103 341
40 % 37 103 366
30 % 37 103 370

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.