Sequence Similarity Clusters for the Entities in PDB 4KZY

Entity #1 | Chains: A
40S Ribosomal Protein SA protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 25026
95 % 3 24 2332
90 % 3 24 2388
70 % 3 24 2379
50 % 29 73 488
40 % 31 75 504
30 % 31 75 503
Entity #10 | Chains: J
40S Ribosomal Protein S9 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 30 1312
95 % 3 30 1784
90 % 3 30 1824
70 % 35 97 311
50 % 35 99 344
40 % 35 103 354
30 % 35 103 361
Entity #11 | Chains: K
40S Ribosomal Protein S10 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 22 2049
95 % 3 24 2407
90 % 3 24 2461
70 % 3 24 2449
50 % 3 25 2243
40 % 3 26 2165
30 % 3 26 2068
Entity #12 | Chains: L
40S Ribosomal Protein S11 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 31 1236
95 % 3 31 1690
90 % 3 31 1721
70 % 33 88 358
50 % 35 98 351
40 % 35 98 382
30 % 35 98 383
Entity #13 | Chains: M
40S Ribosomal Protein S12 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 23 1944
95 % 3 30 1800
90 % 3 30 1843
70 % 3 30 1872
50 % 33 83 444
40 % 33 88 461
30 % 35 91 430
Entity #14 | Chains: N
40S Ribosomal Protein S13 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 30 1319
95 % 3 30 1794
90 % 3 30 1835
70 % 33 90 345
50 % 35 96 366
40 % 35 100 367
30 % 35 100 374
Entity #15 | Chains: O
40S Ribosomal Protein S14 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 23 1939
95 % 3 23 2531
90 % 3 24 2474
70 % 35 94 320
50 % 37 100 321
40 % 324 495 19
30 % 324 495 33
Entity #16 | Chains: P
40S Ribosomal Protein S15 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 5417
95 % 3 25 2205
90 % 3 25 2270
70 % 3 27 2111
50 % 34 92 405
40 % 36 98 389
30 % 36 98 390
Entity #17 | Chains: Q
40S Ribosomal Protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 31 1240
95 % 3 31 1692
90 % 3 31 1723
70 % 3 33 1631
50 % 35 101 336
40 % 35 105 343
30 % 322 496 35
Entity #18 | Chains: R
40S Ribosomal Protein S17 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 30 1322
95 % 3 30 1797
90 % 3 30 1840
70 % 3 31 1765
50 % 36 95 378
40 % 36 95 406
30 % 36 95 409
Entity #19 | Chains: S
40S Ribosomal Protein S18 protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 31 1238
95 % 3 31 1691
90 % 3 31 1722
70 % 33 87 363
50 % 35 97 360
40 % 35 101 364
30 % 325 497 36
Entity #2 | Chains: B
40S Ribosomal Protein S3A protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 25375
95 % 3 24 2348
90 % 3 24 2404
70 % 3 24 2396
50 % 30 74 473
40 % 30 76 505
30 % 30 76 504
Entity #20 | Chains: T
40S Ribosomal Protein S19 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 21437
95 % 3 30 1796
90 % 3 30 1839
70 % 3 30 1869
50 % 33 86 423
40 % 34 91 433
30 % 36 94 408
Entity #21 | Chains: U
40S Ribosomal Protein S20 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 23 1952
95 % 3 25 2213
90 % 3 25 2276
70 % 3 26 2216
50 % 35 94 379
40 % 35 99 375
30 % 328 496 32
Entity #22 | Chains: V
40S Ribosomal Protein S21 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 22782
95 % 3 30 1813
90 % 3 30 1857
70 % 3 31 1775
50 % 32 86 428
40 % 32 86 466
30 % 32 86 460
Entity #23 | Chains: W
40S Ribosomal Protein S15A protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 31 1243
95 % 3 31 1699
90 % 3 31 1730
70 % 36 102 298
50 % 37 107 320
40 % 37 107 341
30 % 329 508 30
Entity #24 | Chains: X
40S Ribosomal Protein S23 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 29 1372
95 % 3 33 1561
90 % 3 34 1559
70 % 35 104 290
50 % 35 108 314
40 % 35 108 336
30 % 35 108 344
Entity #25 | Chains: Y
40S Ribosomal Protein S24 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 21758
95 % 3 30 1799
90 % 3 30 1842
70 % 3 31 1766
50 % 32 94 398
40 % 32 94 426
30 % 32 94 431
Entity #26 | Chains: Z
40S Ribosomal Protein S25 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 24 1868
95 % 3 24 2437
90 % 3 24 2490
70 % 3 25 2271
50 % 29 71 504
40 % 29 73 529
30 % 29 73 531
Entity #27 | Chains: a
40S Ribosomal Protein S26 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 27575
95 % 3 23 2546
90 % 3 23 2595
70 % 3 24 2482
50 % 4 46 1153
40 % 6 48 1043
30 % 6 48 1019
Entity #28 | Chains: b
40S Ribosomal Protein S27 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 30 1336
95 % 3 30 1811
90 % 3 30 1856
70 % 32 89 360
50 % 34 94 382
40 % 34 94 408
30 % 34 94 413
Entity #29 | Chains: c
40S Ribosomal Protein S28 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 27 1541
95 % 3 27 2073
90 % 3 30 1859
70 % 33 93 336
50 % 35 100 340
40 % 35 100 369
30 % 35 100 375
Entity #3 | Chains: C
40S Ribosomal Protein S2 protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 25199
95 % 3 3 21108
90 % 3 22 2681
70 % 3 23 2531
50 % 29 72 492
40 % 29 72 531
30 % 29 72 534
Entity #30 | Chains: d
40S Ribosomal Protein S29 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 31 1249
95 % 3 31 1705
90 % 3 31 1738
70 % 33 87 364
50 % 35 96 367
40 % 35 96 398
30 % 35 96 398
Entity #31 | Chains: e
40S Ribosomal Protein S30 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 5431
95 % 3 13 4843
90 % 3 13 4863
70 % 3 13 4792
50 % 3 14 4326
40 % 3 14 4124
30 % 3 14 3790
Entity #32 | Chains: f
40S Ribosomal Protein S27A protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 22 2054
95 % 3 22 2677
90 % 3 22 2724
70 % 4 42 1210
50 % 4 42 1257
40 % 4 43 1249
30 % 4 43 1224
Entity #33 | Chains: g
40S Ribosomal Protein RACK1 protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 32 1093
95 % 4 32 1500
90 % 4 32 1523
70 % 5 34 1445
50 % 40 96 343
40 % 42 98 342
30 % 42 98 350
Entity #34 | Chains: i
18S Ribosomal RNA rna, length: 1863 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #35 | Chains: l
human initiation factor eIF1 protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 43802
95 % 2 2 32809
90 % 2 2 31412
70 % 2 2 28080
50 % 2 9 6662
40 % 2 9 6195
30 % 2 9 5527
Entity #36 | Chains: n
human initiation factor eIF1A protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 27144
95 % 2 3 22518
90 % 2 3 21799
70 % 2 3 19979
50 % 2 8 7730
40 % 2 8 7098
30 % 2 8 6267
Entity #4 | Chains: D
40S Ribosomal Protein S3 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 15 3401
95 % 3 31 1682
90 % 3 31 1710
70 % 34 92 338
50 % 34 94 394
40 % 36 96 395
30 % 36 99 377
Entity #5 | Chains: E
40S Ribosomal Protein S4X protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 18822
95 % 3 23 2511
90 % 3 30 1808
70 % 32 87 365
50 % 34 96 369
40 % 34 96 400
30 % 34 100 376
Entity #6 | Chains: F
40S Ribosomal Protein S5 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 31 1233
95 % 3 31 1685
90 % 3 31 1715
70 % 33 95 328
50 % 35 102 334
40 % 36 107 340
30 % 36 107 346
Entity #7 | Chains: G
40S Ribosomal Protein S6 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 29 1361
95 % 3 30 1771
90 % 3 30 1812
70 % 3 31 1751
50 % 32 91 408
40 % 32 91 437
30 % 32 91 439
Entity #8 | Chains: H
40S Ribosomal Protein S7 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 30 1311
95 % 3 30 1783
90 % 3 30 1823
70 % 3 31 1755
50 % 32 86 425
40 % 32 90 443
30 % 34 95 407
Entity #9 | Chains: I
40S Ribosomal Protein S8 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 20149
95 % 3 30 1779
90 % 3 30 1819
70 % 3 30 1850
50 % 34 95 376
40 % 34 95 405
30 % 34 95 406

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.