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Rabbit 40S ribosomal subunit in complex with eIF1.
Sequence Clustering and Redundancy Reduction Results
4KZX
Sequence Clusters for the Sequence Entities in PDB 4KZX
Entity #1: Chains: A - 40S ribosomal protein SA protein, length: 295 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 20872
95% 2 12 4382
90% 2 12 4410
70% 2 12 4369
50% 21 44 682
40% 23 46 627
30% 23 46 626
Entity #10: Chains: J - 40S Ribosomal protein S9 protein, length: 194 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 12 3946
95% 2 12 4577
90% 2 12 4598
70% 21 47 565
50% 23 50 535
40% 23 52 550
30% 23 52 547
Entity #11: Chains: K - 40S ribosomal protein S10 protein, length: 165 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 10 5009
95% 2 12 4644
90% 2 12 4660
70% 2 12 4591
50% 2 13 3849
40% 2 14 3436
30% 2 14 3172
Entity #12: Chains: L - 40S ribosomal protein S11 protein, length: 158 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 13 3297
95% 2 13 3954
90% 2 13 3989
70% 21 44 612
50% 23 49 550
40% 23 49 587
30% 23 49 580
Entity #13: Chains: M - 40S ribosomal protein S12 protein, length: 132 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 5632
95% 2 12 4719
90% 2 12 4730
70% 2 12 4653
50% 20 40 754
40% 20 42 757
30% 22 45 660
Entity #14: Chains: N - 40S ribosomal protein S13 protein, length: 151 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 12 4075
95% 2 12 4671
90% 2 12 4686
70% 21 45 595
50% 23 48 562
40% 23 50 574
30% 23 50 569
Entity #15: Chains: O - 40S ribosomal protein S14 protein, length: 151 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 13 3304
95% 2 13 3962
90% 2 13 3997
70% 23 54 450
50% 25 58 431
40% 254 343 34
30% 254 344 45
Entity #16: Chains: P - 40S ribosomal protein S15 protein, length: 145 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 22625
95% 2 13 3973
90% 2 13 4009
70% 2 15 3451
50% 21 46 648
40% 23 55 517
30% 23 55 524
Entity #17: Chains: Q - 40S ribosomal protein S16 protein, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 13 3311
95% 2 13 3971
90% 2 13 4007
70% 2 14 3718
50% 23 52 511
40% 23 54 529
30% 252 338 49
Entity #18: Chains: R - 40S ribosomal protein S17 protein, length: 135 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 5 12240
95% 2 12 4710
90% 2 12 4722
70% 2 13 3999
50% 23 49 554
40% 23 49 590
30% 23 49 584
Entity #19: Chains: S - 40S ribosomal protein S18 protein, length: 152 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 13 3303
95% 2 13 3961
90% 2 13 3996
70% 21 46 577
50% 23 52 509
40% 23 54 528
30% 255 343 48
Entity #2: Chains: B - 40S ribosomal protein S3a protein, length: 264 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 21174
95% 2 12 4425
90% 2 12 4452
70% 2 12 4414
50% 22 43 645
40% 22 44 670
30% 22 44 670
Entity #20: Chains: T - 40S ribosomal protein S19 protein, length: 145 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 22626
95% 2 12 4685
90% 2 12 4701
70% 2 12 4630
50% 21 45 674
40% 22 48 660
30% 24 51 559
Entity #21: Chains: U - 40S ribosomal protein S20 protein, length: 119 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 11 4439
95% 2 13 3993
90% 2 13 4028
70% 2 14 3748
50% 23 48 566
40% 23 52 553
30% 258 342 46
Entity #22: Chains: V - 40S ribosomal protein S21 protein, length: 83 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 23367
95% 2 3 19477
90% 2 12 4813
70% 2 13 4034
50% 20 45 689
40% 20 45 718
30% 20 45 718
Entity #23: Chains: W - 40S ribosomal protein S15A protein, length: 130 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 13 3322
95% 2 13 3985
90% 2 13 4021
70% 23 52 460
50% 24 55 479
40% 24 55 508
30% 258 347 44
Entity #24: Chains: X - 40S ribosomal protein S23 protein, length: 143 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 13 3315
95% 2 15 3439
90% 2 16 3285
70% 23 56 432
50% 23 58 464
40% 23 58 493
30% 23 58 501
Entity #25: Chains: Y - 40S ribosomal protein S24 protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 22761
95% 2 12 4717
90% 2 12 4728
70% 2 13 4002
50% 20 46 675
40% 20 46 700
30% 20 46 704
Entity #26: Chains: Z - 40S ribosomal protein S25 protein, length: 125 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 12 4135
95% 2 12 4734
90% 2 12 4746
70% 2 13 4005
50% 21 43 703
40% 21 45 701
30% 21 45 706
Entity #27: Chains: a - 40S ribosomal protein S26 protein, length: 115 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 22993
95% 2 12 4754
90% 2 12 4768
70% 2 13 4013
50% 3 25 1822
40% 5 27 1488
30% 5 27 1443
Entity #28: Chains: b - 40S ribosomal protein S27 protein, length: 84 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 12 4207
95% 2 12 4800
90% 2 12 4811
70% 20 43 644
50% 22 47 601
40% 22 47 638
30% 22 47 633
Entity #29: Chains: c - 40S ribosomal protein S28 protein, length: 69 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 12 4228
95% 2 12 4814
90% 2 12 4824
70% 21 45 598
50% 23 50 541
40% 23 50 578
30% 23 50 571
Entity #3: Chains: C - 40S ribosomal protein S2 protein, length: 278 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 21021
95% 2 3 17738
90% 2 10 5396
70% 2 11 4874
50% 21 43 697
40% 21 43 724
30% 21 43 724
Entity #30: Chains: d - 40S ribosomal protein S29 protein, length: 56 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 11 4471
95% 2 11 5112
90% 2 13 4062
70% 21 46 581
50% 23 51 527
40% 23 51 567
30% 23 51 561
Entity #31: Chains: e - 40S ribosomal protein S30 protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 22762
95% 2 5 11628
90% 2 5 11438
70% 2 5 10819
50% 2 6 8624
40% 2 6 7857
30% 2 6 6920
Entity #32: Chains: f - 40S ribosomal protein S27A protein, length: 156 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 11 4411
95% 2 11 5040
90% 2 11 5054
70% 3 21 2193
50% 3 21 2212
40% 3 22 2116
30% 3 22 1993
Entity #33: Chains: g - 40S ribosomal protein RACK1 protein, length: 317 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 14 2464
95% 3 14 3090
90% 3 14 3129
70% 4 16 2719
50% 26 52 468
40% 28 54 464
30% 28 54 468
Entity #34: Chains: i - 18S ribosomal RNA rna, length: 1863 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #35: Chains: l - Eukaryotic translation initiation factor 1 protein, length: 113 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 36855
95% 1 2 27771
90% 1 2 26685
70% 1 2 23974
50% 1 5 9793
40% 1 5 8946
30% 1 5 7828
Entity #4: Chains: D - 40S ribosomal protein S3 protein, length: 243 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 21386
95% 2 13 3906
90% 2 13 3937
70% 2 14 3652
50% 22 49 608
40% 24 51 563
30% 24 52 546
Entity #5: Chains: E - 40S ribosomal protein S4X protein, length: 263 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 21189
95% 2 6 9477
90% 2 12 4454
70% 20 43 634
50% 22 47 593
40% 22 47 629
30% 22 49 590
Entity #6: Chains: F - 40S ribosomal protein S5 protein, length: 204 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 13 3272
95% 2 13 3931
90% 2 13 3964
70% 21 47 563
50% 23 53 497
40% 24 56 506
30% 24 56 513
Entity #7: Chains: G - 40S ribosomal protein S6 protein, length: 249 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 12 3822
95% 2 12 4467
90% 2 12 4490
70% 2 13 3929
50% 20 44 699
40% 20 44 725
30% 20 44 725
Entity #8: Chains: H - 40S ribosomal protein S7 protein, length: 194 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 12 3945
95% 2 12 4576
90% 2 12 4597
70% 2 13 3958
50% 20 42 730
40% 20 43 739
30% 22 46 643
Entity #9: Chains: I - 40S ribosomal protein S8 protein, length: 208 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 21908
95% 2 12 4547
90% 2 12 4567
70% 2 12 4511
50% 22 46 609
40% 22 46 645
30% 22 46 641
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.