Sequence Similarity Clusters for the Entities in PDB 4KZX

Entity #1 | Chains: A
40S ribosomal protein SA protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 22432
95 % 2 15 3670
90 % 2 15 3700
70 % 2 15 3647
50 % 21 50 660
40 % 23 52 619
30 % 23 52 617
Entity #10 | Chains: J
40S Ribosomal protein S9 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 20 2024
95 % 2 20 2601
90 % 2 20 2644
70 % 23 63 422
50 % 23 64 461
40 % 23 66 484
30 % 23 66 489
Entity #11 | Chains: K
40S ribosomal protein S10 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 13 3576
95 % 2 15 3720
90 % 2 15 3754
70 % 2 15 3702
50 % 2 16 3393
40 % 2 17 3020
30 % 2 17 2816
Entity #12 | Chains: L
40S ribosomal protein S11 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1845
95 % 2 21 2420
90 % 2 21 2468
70 % 21 55 510
50 % 23 63 469
40 % 23 63 512
30 % 23 63 517
Entity #13 | Chains: M
40S ribosomal protein S12 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 14 3359
95 % 2 20 2640
90 % 2 20 2680
70 % 2 20 2688
50 % 20 51 665
40 % 20 56 636
30 % 22 59 559
Entity #14 | Chains: N
40S ribosomal protein S13 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 20 2049
95 % 2 20 2627
90 % 2 20 2669
70 % 21 56 499
50 % 23 62 479
40 % 23 64 503
30 % 23 64 507
Entity #15 | Chains: O
40S ribosomal protein S14 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1847
95 % 2 21 2425
90 % 2 22 2363
70 % 23 68 393
50 % 25 72 386
40 % 286 397 27
30 % 286 398 39
Entity #16 | Chains: P
40S ribosomal protein S15 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 24308
95 % 2 16 3532
90 % 2 16 3565
70 % 2 18 3049
50 % 21 52 629
40 % 23 64 504
30 % 23 64 508
Entity #17 | Chains: Q
40S ribosomal protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1851
95 % 2 21 2427
90 % 2 21 2473
70 % 2 23 2231
50 % 23 66 445
40 % 23 68 465
30 % 284 392 47
Entity #18 | Chains: R
40S ribosomal protein S17 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 20 2064
95 % 2 20 2637
90 % 2 20 2677
70 % 2 21 2484
50 % 23 63 470
40 % 23 63 513
30 % 23 63 519
Entity #19 | Chains: S
40S ribosomal protein S18 protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1846
95 % 2 21 2423
90 % 2 21 2470
70 % 21 57 488
50 % 23 66 444
40 % 23 68 464
30 % 287 397 46
Entity #2 | Chains: B
40S ribosomal protein S3a protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 22748
95 % 2 15 3682
90 % 2 15 3712
70 % 2 15 3662
50 % 22 49 626
40 % 22 50 656
30 % 22 50 649
Entity #20 | Chains: T
40S ribosomal protein S19 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 24309
95 % 2 20 2633
90 % 2 20 2674
70 % 2 20 2682
50 % 21 56 576
40 % 22 59 576
30 % 24 62 525
Entity #21 | Chains: U
40S ribosomal protein S20 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 14 3372
95 % 2 16 3550
90 % 2 16 3584
70 % 2 17 3219
50 % 23 62 480
40 % 23 66 485
30 % 290 396 41
Entity #22 | Chains: V
40S ribosomal protein S21 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 25117
95 % 2 20 2662
90 % 2 20 2705
70 % 2 21 2494
50 % 20 56 595
40 % 20 56 639
30 % 20 56 634
Entity #23 | Chains: W
40S ribosomal protein S15A protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1855
95 % 2 21 2433
90 % 2 21 2480
70 % 23 66 407
50 % 24 69 420
40 % 24 69 454
30 % 290 401 37
Entity #24 | Chains: X
40S ribosomal protein S23 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 19 2172
95 % 2 23 2182
90 % 2 24 2143
70 % 23 70 385
50 % 23 72 407
40 % 23 72 439
30 % 23 72 451
Entity #25 | Chains: Y
40S ribosomal protein S24 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 24457
95 % 2 20 2639
90 % 2 20 2679
70 % 2 21 2485
50 % 20 60 545
40 % 20 60 578
30 % 20 60 586
Entity #26 | Chains: Z
40S ribosomal protein S25 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 15 3018
95 % 2 15 3737
90 % 2 15 3772
70 % 2 16 3537
50 % 21 49 686
40 % 21 51 687
30 % 21 51 689
Entity #27 | Chains: a
40S ribosomal protein S26 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 24704
95 % 2 14 4075
90 % 2 14 4100
70 % 2 15 3726
50 % 3 30 1593
40 % 5 32 1333
30 % 5 32 1311
Entity #28 | Chains: b
40S ribosomal protein S27 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 20 2091
95 % 2 20 2661
90 % 2 20 2704
70 % 20 57 500
50 % 22 61 503
40 % 22 61 535
30 % 22 61 543
Entity #29 | Chains: c
40S ribosomal protein S28 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 17 2534
95 % 2 17 3209
90 % 2 20 2710
70 % 21 59 478
50 % 23 64 466
40 % 23 64 507
30 % 23 64 510
Entity #3 | Chains: C
40S ribosomal protein S2 protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 22591
95 % 2 3 19047
90 % 2 13 4245
70 % 2 14 3898
50 % 21 49 675
40 % 21 49 711
30 % 21 49 710
Entity #30 | Chains: d
40S ribosomal protein S29 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1874
95 % 2 21 2454
90 % 2 21 2497
70 % 21 57 490
50 % 23 65 452
40 % 23 65 493
30 % 23 65 499
Entity #31 | Chains: e
40S ribosomal protein S30 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 24458
95 % 2 5 12449
90 % 2 5 12214
70 % 2 5 11514
50 % 2 6 9155
40 % 2 6 8338
30 % 2 6 7316
Entity #32 | Chains: f
40S ribosomal protein S27A protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 13 3581
95 % 2 13 4283
90 % 2 13 4316
70 % 3 26 1838
50 % 3 26 1866
40 % 3 27 1815
30 % 3 27 1721
Entity #33 | Chains: g
40S ribosomal protein RACK1 protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 22 1495
95 % 3 22 2007
90 % 3 22 2053
70 % 4 24 1885
50 % 26 63 430
40 % 28 65 428
30 % 28 65 434
Entity #34 | Chains: i
18S ribosomal RNA rna, length: 1863 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #35 | Chains: l
Eukaryotic translation initiation factor 1 protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39424
95 % 1 2 29589
90 % 1 2 28362
70 % 1 2 25397
50 % 1 8 7097
40 % 1 8 6539
30 % 1 8 5799
Entity #4 | Chains: D
40S ribosomal protein S3 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 10507
95 % 2 21 2398
90 % 2 21 2445
70 % 22 62 450
50 % 22 63 512
40 % 24 65 490
30 % 24 66 487
Entity #5 | Chains: E
40S ribosomal protein S4X protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 22762
95 % 2 13 4229
90 % 2 20 2615
70 % 20 54 538
50 % 22 61 495
40 % 22 61 526
30 % 22 63 523
Entity #6 | Chains: F
40S ribosomal protein S5 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1835
95 % 2 21 2409
90 % 2 21 2458
70 % 21 61 461
50 % 23 67 439
40 % 24 70 453
30 % 24 70 461
Entity #7 | Chains: G
40S ribosomal protein S6 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 19 2146
95 % 2 20 2576
90 % 2 20 2620
70 % 2 21 2456
50 % 20 58 562
40 % 20 58 606
30 % 20 58 607
Entity #8 | Chains: H
40S ribosomal protein S7 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 20 2023
95 % 2 20 2600
90 % 2 20 2643
70 % 2 21 2470
50 % 20 53 627
40 % 20 57 622
30 % 22 60 547
Entity #9 | Chains: I
40S ribosomal protein S8 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 23543
95 % 2 20 2597
90 % 2 20 2640
70 % 2 20 2653
50 % 22 60 513
40 % 22 60 541
30 % 22 60 546

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.