Sequence Similarity Clusters for the Entities in PDB 4KZX

Entity #1 | Chains: A
40S ribosomal protein SA protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 23120
95 % 2 15 3777
90 % 2 15 3803
70 % 2 15 3746
50 % 23 52 632
40 % 25 54 597
30 % 25 54 602
Entity #10 | Chains: J
40S Ribosomal protein S9 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 20 2107
95 % 2 20 2686
90 % 2 20 2729
70 % 25 67 397
50 % 25 68 438
40 % 25 70 454
30 % 25 70 466
Entity #11 | Chains: K
40S ribosomal protein S10 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 13 3702
95 % 2 15 3824
90 % 2 15 3854
70 % 2 15 3801
50 % 2 16 3493
40 % 2 17 3109
30 % 2 17 2905
Entity #12 | Chains: L
40S ribosomal protein S11 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1925
95 % 2 21 2499
90 % 2 21 2543
70 % 23 59 484
50 % 25 67 448
40 % 25 67 484
30 % 25 67 490
Entity #13 | Chains: M
40S ribosomal protein S12 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 14 3473
95 % 2 20 2727
90 % 2 20 2765
70 % 2 20 2772
50 % 22 55 609
40 % 22 60 588
30 % 24 63 539
Entity #14 | Chains: N
40S ribosomal protein S13 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 20 2132
95 % 2 20 2713
90 % 2 20 2754
70 % 23 60 471
50 % 25 66 454
40 % 25 68 473
30 % 25 68 481
Entity #15 | Chains: O
40S ribosomal protein S14 protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1927
95 % 2 21 2504
90 % 2 22 2441
70 % 25 72 370
50 % 27 76 379
40 % 301 419 22
30 % 301 420 35
Entity #16 | Chains: P
40S ribosomal protein S15 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 25049
95 % 2 16 3643
90 % 2 16 3668
70 % 2 18 3143
50 % 23 54 608
40 % 25 68 474
30 % 25 68 482
Entity #17 | Chains: Q
40S ribosomal protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1930
95 % 2 21 2506
90 % 2 21 2548
70 % 2 23 2298
50 % 25 70 422
40 % 25 72 444
30 % 299 414 44
Entity #18 | Chains: R
40S ribosomal protein S17 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 20 2145
95 % 2 20 2724
90 % 2 20 2763
70 % 2 21 2560
50 % 25 67 449
40 % 25 67 485
30 % 25 67 491
Entity #19 | Chains: S
40S ribosomal protein S18 protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1926
95 % 2 21 2502
90 % 2 21 2545
70 % 23 61 465
50 % 25 70 421
40 % 25 72 443
30 % 302 419 42
Entity #2 | Chains: B
40S ribosomal protein S3a protein, length: 264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 23446
95 % 2 15 3790
90 % 2 15 3817
70 % 2 15 3761
50 % 24 51 604
40 % 24 52 637
30 % 24 52 634
Entity #20 | Chains: T
40S ribosomal protein S19 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 25050
95 % 2 20 2719
90 % 2 20 2759
70 % 2 20 2764
50 % 23 60 541
40 % 24 63 549
30 % 26 66 498
Entity #21 | Chains: U
40S ribosomal protein S20 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 14 3488
95 % 2 16 3661
90 % 2 16 3687
70 % 2 17 3315
50 % 25 66 455
40 % 25 70 456
30 % 305 418 37
Entity #22 | Chains: V
40S ribosomal protein S21 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 25873
95 % 2 20 2750
90 % 2 20 2791
70 % 2 21 2569
50 % 22 60 553
40 % 22 60 589
30 % 22 60 595
Entity #23 | Chains: W
40S ribosomal protein S15A protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1934
95 % 2 21 2513
90 % 2 21 2556
70 % 25 70 381
50 % 26 73 402
40 % 26 73 437
30 % 305 423 33
Entity #24 | Chains: X
40S ribosomal protein S23 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 19 2247
95 % 2 23 2251
90 % 2 24 2201
70 % 25 74 367
50 % 25 76 396
40 % 25 76 430
30 % 25 76 436
Entity #25 | Chains: Y
40S ribosomal protein S24 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 25203
95 % 2 20 2726
90 % 2 20 2764
70 % 2 21 2561
50 % 22 64 517
40 % 22 64 551
30 % 22 64 557
Entity #26 | Chains: Z
40S ribosomal protein S25 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 15 3119
95 % 2 15 3842
90 % 2 15 3873
70 % 2 16 3635
50 % 23 51 647
40 % 23 53 668
30 % 23 53 662
Entity #27 | Chains: a
40S ribosomal protein S26 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 25459
95 % 2 14 4198
90 % 2 14 4216
70 % 2 15 3824
50 % 3 30 1642
40 % 5 32 1374
30 % 5 32 1351
Entity #28 | Chains: b
40S ribosomal protein S27 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 20 2174
95 % 2 20 2749
90 % 2 20 2790
70 % 22 61 473
50 % 24 65 477
40 % 24 65 515
30 % 24 65 518
Entity #29 | Chains: c
40S ribosomal protein S28 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 17 2615
95 % 2 17 3310
90 % 2 20 2796
70 % 23 63 454
50 % 25 68 442
40 % 25 68 476
30 % 25 68 484
Entity #3 | Chains: C
40S ribosomal protein S2 protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 23288
95 % 2 3 19596
90 % 2 13 4367
70 % 2 14 4006
50 % 23 51 642
40 % 23 51 681
30 % 23 51 675
Entity #30 | Chains: d
40S ribosomal protein S29 protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1955
95 % 2 21 2535
90 % 2 21 2575
70 % 23 61 466
50 % 25 69 432
40 % 25 69 466
30 % 25 69 473
Entity #31 | Chains: e
40S ribosomal protein S30 protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 25204
95 % 2 5 12847
90 % 2 5 12607
70 % 2 5 11860
50 % 2 6 9439
40 % 2 6 8593
30 % 2 6 7531
Entity #32 | Chains: f
40S ribosomal protein S27A protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 13 3708
95 % 2 13 4420
90 % 2 13 4443
70 % 3 26 1896
50 % 3 26 1915
40 % 3 27 1860
30 % 3 27 1778
Entity #33 | Chains: g
40S ribosomal protein RACK1 protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 22 1545
95 % 3 22 2066
90 % 3 22 2108
70 % 4 24 1944
50 % 28 67 408
40 % 30 69 424
30 % 30 69 432
Entity #34 | Chains: i
18S ribosomal RNA rna, length: 1863 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #35 | Chains: l
Eukaryotic translation initiation factor 1 protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 40596
95 % 1 2 30436
90 % 1 2 29156
70 % 1 2 26092
50 % 1 8 7312
40 % 1 8 6741
30 % 1 8 5975
Entity #4 | Chains: D
40S ribosomal protein S3 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 10906
95 % 2 21 2478
90 % 2 21 2523
70 % 24 66 428
50 % 24 67 486
40 % 26 69 462
30 % 26 70 465
Entity #5 | Chains: E
40S ribosomal protein S4X protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 23460
95 % 2 13 4361
90 % 2 20 2697
70 % 22 58 499
50 % 24 65 471
40 % 24 65 510
30 % 24 67 496
Entity #6 | Chains: F
40S ribosomal protein S5 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 21 1914
95 % 2 21 2489
90 % 2 21 2535
70 % 23 65 437
50 % 25 71 416
40 % 26 74 436
30 % 26 74 442
Entity #7 | Chains: G
40S ribosomal protein S6 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 19 2226
95 % 2 20 2659
90 % 2 20 2703
70 % 2 21 2533
50 % 22 62 532
40 % 22 62 564
30 % 22 62 570
Entity #8 | Chains: H
40S ribosomal protein S7 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 20 2106
95 % 2 20 2685
90 % 2 20 2728
70 % 2 21 2547
50 % 22 57 580
40 % 22 61 574
30 % 24 64 527
Entity #9 | Chains: I
40S ribosomal protein S8 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 24263
95 % 2 20 2681
90 % 2 20 2725
70 % 2 20 2733
50 % 24 64 487
40 % 24 64 523
30 % 24 64 525

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.