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Rabbit 40S ribosomal subunit in complex with eIF1.
Sequence Clustering and Redundancy Reduction Results
4KZX
Sequence Clusters for the Sequence Entities in PDB 4KZX
Entity #1: Chains: A - 40S ribosomal protein SA protein, length: 295 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 20494
95% 2 10 5234
90% 2 10 5253
70% 2 10 5176
50% 21 41 697
40% 23 43 648
30% 23 43 643
Entity #10: Chains: J - 40S Ribosomal protein S9 protein, length: 194 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 10 4823
95% 2 10 5421
90% 2 10 5430
70% 21 44 587
50% 23 47 550
40% 23 49 563
30% 23 49 559
Entity #11: Chains: K - 40S ribosomal protein S10 protein, length: 165 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 8 7051
95% 2 10 5482
90% 2 10 5489
70% 2 10 5377
50% 2 11 4594
40% 2 12 4014
30% 2 12 3649
Entity #12: Chains: L - 40S ribosomal protein S11 protein, length: 158 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 11 4284
95% 2 11 4882
90% 2 11 4901
70% 21 42 616
50% 23 47 552
40% 23 47 588
30% 23 47 588
Entity #13: Chains: M - 40S ribosomal protein S12 protein, length: 132 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 7 8068
95% 2 10 5568
90% 2 10 5574
70% 2 10 5454
50% 20 38 772
40% 20 40 762
30% 22 43 667
Entity #14: Chains: N - 40S ribosomal protein S13 protein, length: 151 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 10 4932
95% 2 10 5512
90% 2 10 5522
70% 21 43 603
50% 23 46 569
40% 23 48 573
30% 23 48 569
Entity #15: Chains: O - 40S ribosomal protein S14 protein, length: 151 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 11 4288
95% 2 11 4890
90% 2 11 4909
70% 23 51 464
50% 25 55 438
40% 243 325 36
30% 243 325 47
Entity #16: Chains: P - 40S ribosomal protein S15 protein, length: 145 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 22194
95% 2 11 4896
90% 2 11 4914
70% 2 13 3882
50% 21 44 665
40% 23 53 528
30% 23 53 531
Entity #17: Chains: Q - 40S ribosomal protein S16 protein, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 11 4293
95% 2 11 4895
90% 2 11 4913
70% 2 12 4501
50% 23 49 533
40% 23 51 549
30% 241 321 50
Entity #18: Chains: R - 40S ribosomal protein S17 protein, length: 135 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 5 11987
95% 2 10 5559
90% 2 10 5567
70% 2 11 4852
50% 23 46 570
40% 23 46 609
30% 23 46 606
Entity #19: Chains: S - 40S ribosomal protein S18 protein, length: 152 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 11 4287
95% 2 11 4887
90% 2 11 4906
70% 21 44 590
50% 23 49 532
40% 23 51 548
30% 244 326 49
Entity #2: Chains: B - 40S ribosomal protein S3a protein, length: 264 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 20785
95% 2 10 5291
90% 2 10 5310
70% 2 10 5223
50% 22 41 659
40% 22 42 672
30% 22 42 678
Entity #20: Chains: T - 40S ribosomal protein S19 protein, length: 145 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 22195
95% 2 10 5532
90% 2 10 5541
70% 2 10 5424
50% 21 42 686
40% 22 45 677
30% 24 48 570
Entity #21: Chains: U - 40S ribosomal protein S20 protein, length: 119 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 5533
95% 2 11 4927
90% 2 11 4944
70% 2 12 4555
50% 23 46 573
40% 23 50 556
30% 247 326 46
Entity #22: Chains: V - 40S ribosomal protein S21 protein, length: 83 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 22905
95% 2 3 19113
90% 2 10 5668
70% 2 11 4891
50% 20 42 707
40% 20 42 733
30% 20 42 731
Entity #23: Chains: W - 40S ribosomal protein S15A protein, length: 130 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 11 4306
95% 2 11 4913
90% 2 11 4931
70% 23 49 484
50% 24 52 489
40% 24 52 529
30% 247 330 45
Entity #24: Chains: X - 40S ribosomal protein S23 protein, length: 143 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 11 4294
95% 2 13 3869
90% 2 14 3669
70% 23 53 444
50% 23 55 478
40% 23 55 504
30% 23 55 514
Entity #25: Chains: Y - 40S ribosomal protein S24 protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 22323
95% 2 10 5564
90% 2 10 5571
70% 2 11 4854
50% 20 44 674
40% 20 44 702
30% 20 44 702
Entity #26: Chains: Z - 40S ribosomal protein S25 protein, length: 125 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 10 5002
95% 2 10 5582
90% 2 10 5588
70% 2 11 4863
50% 2 12 4341
40% 21 42 713
30% 21 42 714
Entity #27: Chains: a - 40S ribosomal protein S26 protein, length: 115 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 22550
95% 2 10 5610
90% 2 10 5615
70% 2 11 4873
50% 3 23 2004
40% 5 25 1571
30% 5 25 1508
Entity #28: Chains: b - 40S ribosomal protein S27 protein, length: 84 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 10 5081
95% 2 10 5664
90% 2 10 5666
70% 20 41 644
50% 22 45 610
40% 22 45 638
30% 22 45 634
Entity #29: Chains: c - 40S ribosomal protein S28 protein, length: 69 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 10 5094
95% 2 10 5680
90% 2 10 5683
70% 21 43 607
50% 23 48 540
40% 23 48 576
30% 23 48 575
Entity #3: Chains: C - 40S ribosomal protein S2 protein, length: 278 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 20639
95% 2 3 17433
90% 2 8 6809
70% 2 9 5751
50% 21 40 710
40% 21 40 739
30% 21 40 736
Entity #30: Chains: d - 40S ribosomal protein S29 protein, length: 56 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 5618
95% 2 9 6214
90% 2 11 4978
70% 21 44 595
50% 23 48 541
40% 23 48 577
30% 23 48 576
Entity #31: Chains: e - 40S ribosomal protein S30 protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 22324
95% 2 5 11438
90% 2 5 11251
70% 2 5 10631
50% 2 6 8476
40% 2 6 7727
30% 2 6 6820
Entity #32: Chains: f - 40S ribosomal protein S27A protein, length: 156 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 9 5468
95% 2 9 6072
90% 2 9 6052
70% 3 19 2439
50% 3 19 2424
40% 3 20 2281
30% 3 20 2135
Entity #33: Chains: g - 40S ribosomal protein RACK1 protein, length: 317 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 12 2860
95% 3 12 3506
90% 3 12 3537
70% 3 13 3310
50% 25 49 482
40% 27 51 469
30% 27 51 486
Entity #34: Chains: i - 18S ribosomal RNA rna, length: 1863 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #35: Chains: l - Eukaryotic translation initiation factor 1 protein, length: 113 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 36076
95% 1 2 27181
90% 1 2 26132
70% 1 2 23543
50% 1 5 9626
40% 1 5 8789
30% 1 5 7701
Entity #4: Chains: D - 40S ribosomal protein S3 protein, length: 243 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 20989
95% 2 11 4812
90% 2 11 4826
70% 2 12 4334
50% 22 46 628
40% 24 48 570
30% 24 49 558
Entity #5: Chains: E - 40S ribosomal protein S4X protein, length: 263 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 20800
95% 2 6 9300
90% 2 10 5312
70% 20 41 643
50% 22 45 602
40% 22 45 631
30% 22 47 600
Entity #6: Chains: F - 40S ribosomal protein S5 protein, length: 204 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 11 4252
95% 2 11 4850
90% 2 11 4865
70% 21 44 586
50% 23 50 515
40% 24 53 525
30% 24 53 529
Entity #7: Chains: G - 40S ribosomal protein S6 protein, length: 249 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 10 4731
95% 2 10 5321
90% 2 10 5337
70% 2 11 4763
50% 20 42 699
40% 20 42 724
30% 20 42 720
Entity #8: Chains: H - 40S ribosomal protein S7 protein, length: 194 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 10 4822
95% 2 10 5420
90% 2 10 5429
70% 2 11 4801
50% 20 40 730
40% 20 41 741
30% 22 44 649
Entity #9: Chains: I - 40S ribosomal protein S8 protein, length: 208 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 21497
95% 2 10 5389
90% 2 10 5399
70% 2 10 5299
50% 22 44 618
40% 22 44 652
30% 22 44 648
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.