Sequence Similarity Clusters for the Entities in PDB 4KXT

Entity #1 | Chains: A
Protein argonaute-1 protein, length: 862 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50909
95 % 3 4 15571 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 3 4 15290
70 % 7 25 2328
50 % 7 25 2311
40 % 7 25 2300
30 % 7 25 2187
Entity #2 | Chains: B
RNA rna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures