Sequence Similarity Clusters for the Entities in PDB 4KXT

Entity #1 | Chains: A
Protein argonaute-1 protein, length: 862 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49964
95 % 3 4 15284 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 3 4 15000
70 % 7 25 2265
50 % 7 25 2243
40 % 7 25 2232
30 % 7 25 2132
Entity #2 | Chains: B
RNA rna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.