Sequence Similarity Clusters for the Entities in PDB 4KNY

Entity #1 | Chains: A,B
KDP operon transcriptional regulatory protein KdpE protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41228
95 % 2 2 18886 Flexibility: High
Max RMSD: 19.1, Avg RMSD: 12.8
PDBFlex
90 % 2 2 18473
70 % 2 2 17103
50 % 2 2 14859
40 % 2 2 13242
30 % 17 19 1266
Entity #2 | Chains: Y
Promoter DNA dna, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: Z
Promoter DNA dna, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures