Sequence Similarity Clusters for the Entities in PDB 4KJI

Entity #1 | Chains: A,B
RsmN, a RNA-binding protein of Regulator of Secondary Metabolism protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28062
95 % 3 3 21107 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 3 3 20467
70 % 3 3 18722
50 % 3 3 16233
40 % 3 3 14412
30 % 3 3 12126
Entity #2 | Chains: C,D
RsmZ-2 rna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures