Sequence Similarity Clusters for the Entities in PDB 4KIS

Entity #1 | Chains: A,B,C,D
Putative integrase [Bacteriophage A118] protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 4854
95 % 2 2 5592 Flexibility: High
Max RMSD: 13.9, Avg RMSD: 10.4
PDBFlex
90 % 2 2 5613
70 % 2 2 5524
50 % 2 2 5225
40 % 2 2 4916
30 % 2 2 4472
Entity #2 | Chains: E,G,I,K
DNA (26-MER) dna, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F,H,J,L
DNA (26-MER) dna, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures